RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 MTHFRP42898 656 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 POU5F1Q01860 360 aaKnown RBP16.07■□□□□ 0.16
ATG4D-207ENST00000587256 EHHADHQ08426 723 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 ZBTB6Q15916 424 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 SPATA1Q5VX52 437 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 KANK3Q6NY19 840 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 CRELD2Q6UXH1 353 aaPredicted RBP16.07■□□□□ 0.16
ATG4D-207ENST00000587256 SPATA31D4Q6ZUB0 917 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 EPM2AIP1Q7L775 607 aaPredicted RBP16.07■□□□□ 0.16
ATG4D-207ENST00000587256 BRSK2Q8IWQ3 736 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 CCDC34Q96HJ3 373 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 RPGRIP1Q96KN7 1286 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 SUSD3Q96L08 255 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 CLSTN3Q9BQT9 956 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 CD320Q9NPF0 282 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 MTRRQ9UBK8 725 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 CDY1Q9Y6F8 540 aa16.07■□□□□ 0.16
ATG4D-207ENST00000587256 EXTL3O43909 919 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 SP100P23497 879 aaPredicted RBP16.06■□□□□ 0.16
ATG4D-207ENST00000587256 OR1D2P34982 312 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 ATAT1Q5SQI0 421 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 VARS2Q5ST30 1063 aaKnown RBP16.06■□□□□ 0.16
ATG4D-207ENST00000587256 LIN9Q5TKA1 542 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 KRBA2Q6ZNG9 492 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 HS2ST1Q7LGA3 356 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 GPD1LQ8N335 351 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 KREMEN2Q8NCW0 462 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 ZSWIM2Q8NEG5 633 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 APPL2Q8NEU8 664 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 ZNF507Q8TCN5 953 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 SCFD1Q8WVM8 642 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 CCDC47Q96A33 483 aaKnown RBP16.06■□□□□ 0.16
ATG4D-207ENST00000587256 PLEKHA4Q9H4M7 779 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 CIZ1Q9ULV3 898 aaPredicted RBP16.06■□□□□ 0.16
ATG4D-207ENST00000587256 BACE2Q9Y5Z0 518 aa16.06■□□□□ 0.16
ATG4D-207ENST00000587256 ANK1P16157 1881 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 C19orf67A6NJJ6 358 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 H7C4K7 107 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 PPEF2O14830 753 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 ADAM12O43184 909 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 KLRC4O43908 158 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 C1RP00736 705 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 PRR29P0C7W0 189 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 HOXD13P35453 343 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 TFAMQ00059 246 aaKnown RBP16.05■□□□□ 0.16
ATG4D-207ENST00000587256 KMT5BQ4FZB7 885 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 ZNF280DQ6N043 979 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 DSTYKQ6XUX3 929 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 GPR149Q86SP6 731 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 NT5DC4Q86YG4 428 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 EFCAB13Q8IY85 973 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 HDAC7Q8WUI4 952 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 POMKQ9H5K3 350 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 AGPAT3Q9NRZ7 376 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 HSPBP1Q9NZL4 362 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 FBXW11Q9UKB1 542 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 PCDHB8Q9UN66 801 aa16.05■□□□□ 0.16
ATG4D-207ENST00000587256 RFPL2O75678 378 aa16.04■□□□□ 0.16
ATG4D-207ENST00000587256 ZNF202O95125 648 aa16.04■□□□□ 0.16
ATG4D-207ENST00000587256 RPN1P04843 607 aaKnown RBP16.04■□□□□ 0.16
ATG4D-207ENST00000587256 CYP2J2P51589 502 aa16.04■□□□□ 0.16
ATG4D-207ENST00000587256 ARPP19P56211 112 aa16.04■□□□□ 0.16
ATG4D-207ENST00000587256 BMT2Q1RMZ1 405 aa16.04■□□□□ 0.16
ATG4D-207ENST00000587256 CTXN3Q4LDR2 81 aa16.04■□□□□ 0.16
ATG4D-207ENST00000587256 C9orf57Q5W0N0 161 aa16.04■□□□□ 0.16
ATG4D-207ENST00000587256 LILRA6Q6PI73 481 aa16.04■□□□□ 0.16
ATG4D-207ENST00000587256 C15orf39Q6ZRI6 1047 aa16.04■□□□□ 0.16
ATG4D-207ENST00000587256 USP37Q86T82 979 aa16.04■□□□□ 0.16
ATG4D-207ENST00000587256 CMASQ8NFW8 434 aaPredicted RBP16.04■□□□□ 0.16
ATG4D-207ENST00000587256 SMG7Q92540 1137 aaKnown RBP16.04■□□□□ 0.16
ATG4D-207ENST00000587256 PIDD1Q9HB75 910 aa16.04■□□□□ 0.16
ATG4D-207ENST00000587256 DPP3Q9NY33 737 aa16.04■□□□□ 0.16
ATG4D-207ENST00000587256 MUC3AQ02505 3323 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 CCDC195A0A1B0GUA6 201 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 LOC730098B7Z3J9 87 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 M0QZQ0 153 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 CLIC2O15247 247 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 C8AP07357 584 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 TMEM191BP0C7N4 346 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 ODC1P11926 461 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 AARSP49588 968 aaKnown RBP eCLIP16.03■□□□□ 0.16
ATG4D-207ENST00000587256 WNT7BP56706 349 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 SNRPFP62306 86 aaKnown RBP16.03■□□□□ 0.16
ATG4D-207ENST00000587256 ROR1Q01973 937 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 YWHAHQ04917 246 aaPredicted RBP16.03■□□□□ 0.16
ATG4D-207ENST00000587256 STK4Q13043 487 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 PSMD2Q13200 908 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 RAB33AQ14088 237 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 KNOP1Q1ED39 458 aaKnown RBP16.03■□□□□ 0.16
ATG4D-207ENST00000587256 PPM1LQ5SGD2 360 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 RSPO2Q6UXX9 243 aaPredicted RBP16.03■□□□□ 0.16
ATG4D-207ENST00000587256 CCDC149Q6ZUS6 474 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 CBWD2Q8IUF1 395 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 KIAA0895Q8NCT3 520 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 FEZF2Q8TBJ5 459 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 ZNF560Q96MR9 790 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 KIAA1586Q9HCI6 787 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 PDE11AQ9HCR9 933 aa16.03■□□□□ 0.16
ATG4D-207ENST00000587256 ZDHHC7Q9NXF8 308 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms