RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	CNPY4	Q8N129	248 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	VGLL2	Q8N8G2	317 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	TDRD7	Q8NHU6	1098 aa	Known RBP	5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	WDR66	Q8TBY9	1149 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	TEKT1	Q969V4	418 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	CDCA5	Q96FF9	252 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	TMEM176A	Q96HP8	235 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	FAM84B	Q96KN1	310 aa	Predicted RBP	5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	NEUROD6	Q96NK8	337 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	GML	Q99445	158 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	TGIF2	Q9GZN2	237 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	VEZT	Q9HBM0	779 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	GBA2	Q9HCG7	927 aa	Predicted RBP	5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	STRIP2	Q9ULQ0	834 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	PA2G4	Q9UQ80	394 aa	Known RBP	5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	TNN	Q9UQP3	1299 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792	PAPPA2	Q9BXP8	1791 aa		5.6	□□□□□ -1.51
ZNF540-204	ENST00000586792		A0A0A6YYK5	440 aa	Predicted RBP	5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792		A0A1B0GUL7	405 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	CLRN2	A0PK11	232 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	SURF6	O75683	361 aa	Known RBP	5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	ERBB2	P04626	1255 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	HSPA1A	P0DMV8	641 aa	Known RBP	5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	HSPA1B	P0DMV9	641 aa	Known RBP	5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	CDK4	P11802	303 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	GJA4	P35212	333 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	RFX5	P48382	616 aa	Predicted RBP	5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	FKBP1B	P68106	108 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	SLC25A3	Q00325	362 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	MAP2K1	Q02750	393 aa	Predicted RBP	5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	TFCP2	Q12800	502 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	BIRC2	Q13490	618 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	PCOLCE	Q15113	449 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	MBNL2	Q5VZF2	373 aa	Known RBP	5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	TRIM68	Q6AZZ1	485 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	ATG9A	Q7Z3C6	839 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	DZIP1	Q86YF9	867 aa	Known RBP	5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	ERC1	Q8IUD2	1116 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	CERS5	Q8N5B7	392 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	DNAJC5G	Q8N7S2	189 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	JMY	Q8N9B5	988 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	GPR150	Q8NGU9	434 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	SEC16B	Q96JE7	1060 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	CAPNS2	Q96L46	248 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	KCNJ15	Q99712	375 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	NOL10	Q9BSC4	688 aa	Known RBP	5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	PIF1	Q9H611	641 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	GABBR1	Q9UBS5	961 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	DENND2A	Q9ULE3	1009 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	PPP2R3B	Q9Y5P8	575 aa		5.59	□□□□□ -1.51
ZNF540-204	ENST00000586792	ASTN2	O75129	1339 aa	Predicted RBP	5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	PNMA6E	A0A0J9YXQ4	647 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	ZAR1L	A6NP61	321 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	SUSD5	O60279	629 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	MSC	O60682	206 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	HSP90AA1	P07900	732 aa	Known RBP	5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	UQCRFS1P1	P0C7P4	283 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	FGFR2	P21802	821 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	PAX3	P23760	479 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	MRE11	P49959	708 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	KRTAP10-9	P60411	292 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	NOG	Q13253	232 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	PLEKHG6	Q3KR16	790 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	SUPT20HL1	Q3ZLR7	823 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	C4orf46	Q504U0	113 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	CCDC158	Q5M9N0	1113 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	TTC39A	Q5SRH9	613 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	CST9	Q5W186	159 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	RGMB	Q6NW40	437 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	KRBA2	Q6ZNG9	492 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	ARMC9	Q7Z3E5	817 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	FILIP1	Q7Z7B0	1213 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	MRGPRE	Q86SM8	312 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	HOOK2	Q96ED9	719 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	PHF20	Q9BVI0	1012 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	OSBPL2	Q9H1P3	480 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	PCDH12	Q9NPG4	1184 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	ABCF2	Q9UG63	623 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	COMMD10	Q9Y6G5	202 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	THSD7B	Q9C0I4	1608 aa		5.58	□□□□□ -1.52
ZNF540-204	ENST00000586792	PPP1R12A	O14974	1030 aa	Predicted RBP	5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	PRC1	O43663	620 aa		5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	WDHD1	O75717	1129 aa	Predicted RBP	5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	PTMA	P06454	111 aa	Known RBP	5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	ITGB6	P18564	788 aa		5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	MAP2K2	P36507	400 aa		5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	TIMM10	P62072	90 aa		5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	ATP8B2	P98198	1209 aa		5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	PRKG1	Q13976	671 aa		5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	BTBD8	Q5XKL5	378 aa		5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	LBX2	Q6XYB7	198 aa		5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	OTOP2	Q7RTS6	562 aa		5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	FAM178B	Q8IXR5	827 aa		5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	GSPT2	Q8IYD1	628 aa	Known RBP	5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	NLGN4X	Q8N0W4	816 aa		5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	WDR48	Q8TAF3	677 aa		5.57	□□□□□ -1.52
ZNF540-204	ENST00000586792	SSH3	Q8TE77	659 aa		5.57	□□□□□ -1.52

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