RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 VRTNQ9H8Y1 702 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 RAB20Q9NX57 234 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 AGAP1Q9UPQ3 857 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 NLRC5Q86WI3 1866 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 SCN1AP35498 2009 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 CST3P01034 146 aaPredicted RBP18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 KRT19P08727 400 aa18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 LINC00271P0C7V0 271 aa18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 PAX3P23760 479 aa18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 ATICP31939 592 aa18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 UBASH3AP57075 661 aa18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 TRPC3Q13507 836 aa18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 TAF4BQ92750 862 aa18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 NAP1L5Q96NT1 182 aaPredicted RBP18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 PAAF1Q9BRP4 392 aa18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 XYLT2Q9H1B5 865 aa18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 IFNKQ9P0W0 207 aa18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 GCNT4Q9P109 453 aa18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 R3HCC1Q9Y3T6 440 aaKnown RBP18.27■□□□□ 0.52
PRKCSH-203ENST00000586486 GRXCR1A8MXD5 290 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 PPEF2O14830 753 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 ASS1P00966 412 aaKnown RBP18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 GALTP07902 379 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 OR1G1P47890 313 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 SLC11A1P49279 550 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 RABGGTBP53611 331 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 BCAR1P56945 870 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 NR1I3Q14994 352 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 EXOC3L4Q17RC7 722 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 SCARA3Q6AZY7 606 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 DCLRE1AQ6PJP8 1040 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 GBP6Q6ZN66 633 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 LMO3Q8TAP4 145 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 SEMA4DQ92854 862 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 ERGIC2Q96RQ1 377 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 CACNG4Q9UBN1 327 aa18.27■□□□□ 0.51
PRKCSH-203ENST00000586486 LCHNA4D1U4 455 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 GOLGA6L3A6NEY3 463 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 NRP1O14786 923 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 CBFA2T2O43439 604 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 ALDH2P05091 517 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 TPM3P06753 285 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 ALDH7A1P49419 539 aaKnown RBP18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 AARSP49588 968 aaKnown RBP eCLIP18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 TAF6P49848 677 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 MYL6P60660 151 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 UBXN1Q04323 297 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 MYO1EQ12965 1108 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 SGSM1Q2NKQ1 1148 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 KCNT2Q6UVM3 1135 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 C3orf58Q8NDZ4 430 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 ZNF558Q96NG5 402 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 IMPG2Q9BZV3 1241 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 AAASQ9NRG9 546 aa18.26■□□□□ 0.51
PRKCSH-203ENST00000586486 A0A1W2PQC6 194 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 LINC01553A4QN01 128 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 TEX33O43247 280 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 B3GAT3O94766 335 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 KIF4AO95239 1232 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 LILRA4P59901 499 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 RAB30Q15771 203 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 ZNF699Q32M78 642 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 SV2CQ496J9 727 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 CD300LGQ6UXG3 332 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 COLGALT1Q8NBJ5 622 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 EHBP1Q8NDI1 1231 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 HPDLQ96IR7 371 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 FAXDC2Q96IV6 333 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 CRACR2AQ9BSW2 395 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 COLEC11Q9BWP8 271 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 XPO4Q9C0E2 1151 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 INTS2Q9H0H0 1204 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 MARCH5Q9NX47 278 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 FAN1Q9Y2M0 1017 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 RWDD3Q9Y3V2 267 aa18.25■□□□□ 0.51
PRKCSH-203ENST00000586486 AP5Z1O43299 807 aa18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 PON1P27169 355 aa18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 PPM1AP35813 382 aa18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 NOP14P78316 857 aaKnown RBP18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 KCNMA1Q12791 1236 aa18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 SPOUT1Q5T280 376 aaKnown RBP18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 TRIM65Q6PJ69 517 aa18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 CCDC150Q8NCX0 1101 aa18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 PBX4Q9BYU1 374 aa18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 GDAP2Q9NXN4 497 aa18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 SIK3Q9Y2K2 1263 aa18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 PRG3Q9Y2Y8 225 aaPredicted RBP18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 LAMA2P24043 3122 aaKnown RBP18.24■□□□□ 0.51
PRKCSH-203ENST00000586486 SPTLC1O15269 473 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 LRRN2O75325 713 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 MYOGP15173 224 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 GSE1Q14687 1217 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 WDR44Q5JSH3 913 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 PRPF38BQ5VTL8 546 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 SLC39A11Q8N1S5 342 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 RABGGTAQ92696 567 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 GRPEL1Q9HAV7 217 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 ADAM28Q9UKQ2 775 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 YBX2Q9Y2T7 364 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 TSC2P49815 1807 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms