RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 GJD2Q9UKL4 321 aa10.55□□□□□ -0.72
ZNF540-203ENST00000586134 GABRQQ9UN88 632 aa10.55□□□□□ -0.72
ZNF540-203ENST00000586134 LOC105371267A0A1B0GV96 52 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 PIK3CDO00329 1044 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 TEX33O43247 280 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 TSPAN1O60635 241 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 AFPP02771 609 aaKnown RBP10.54□□□□□ -0.72
ZNF540-203ENST00000586134 ETV3P41162 512 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 MMP13P45452 471 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 SLC34A1Q06495 639 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 WASHC5Q12768 1159 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 SHROOM1Q2M3G4 852 aaPredicted RBP10.54□□□□□ -0.72
ZNF540-203ENST00000586134 TWF2Q6IBS0 349 aaKnown RBP10.54□□□□□ -0.72
ZNF540-203ENST00000586134 LRRC74BQ6ZQY2 392 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 TAOK1Q7L7X3 1001 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 SFR1Q86XK3 245 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 PUS7LQ9H0K6 701 aaKnown RBP10.54□□□□□ -0.72
ZNF540-203ENST00000586134 ISCUQ9H1K1 167 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 IL20Q9NYY1 176 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 THEGQ9P2T0 379 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 RBPJLQ9UBG7 517 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 SLC4A4Q9Y6R1 1079 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 MYH4Q9Y623 1939 aa10.54□□□□□ -0.72
ZNF540-203ENST00000586134 GRID2IPA4D2P6 1211 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 A6NJR5 290 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 TMEM114B3SHH9 223 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 GLI1P08151 1106 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 CCL5P13501 91 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 SCG2P13521 617 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 EN2P19622 333 aaPredicted RBP10.53□□□□□ -0.72
ZNF540-203ENST00000586134 GTF2H1P32780 548 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 ERVK-9P63128 1117 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 CCNA1P78396 465 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 STK3Q13188 491 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 ACVR2BQ13705 512 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 CTC1Q2NKJ3 1217 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 CFAP221Q4G0U5 840 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 FYB2Q5VWT5 728 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 TMEM214Q6NUQ4 689 aaKnown RBP10.53□□□□□ -0.72
ZNF540-203ENST00000586134 PDXDC1Q6P996 788 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 TTC23LQ6PF05 361 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 SUN5Q8TC36 379 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 PPP1R10Q96QC0 940 aaKnown RBP10.53□□□□□ -0.72
ZNF540-203ENST00000586134 PLGRKTQ9HBL7 147 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 METTL5Q9NRN9 209 aaKnown RBP10.53□□□□□ -0.72
ZNF540-203ENST00000586134 TRIM10Q9UDY6 481 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 TMX2Q9Y320 296 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 PCDHA5Q9Y5H7 936 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 ARHGAP10A1A4S6 786 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 KIF28PB7ZC32 967 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 USP17L12C9JPN9 530 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 USP17L21D6R901 530 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 TRAFD1O14545 582 aaPredicted RBP10.53□□□□□ -0.72
ZNF540-203ENST00000586134 NDC80O14777 642 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 MAGEB3O15480 346 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 PRKAB2O43741 272 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 PPP6R2O75170 966 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 EYA4O95677 639 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 HMGCRP04035 888 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 COL6A2P12110 1019 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 CHN1P15882 459 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 HMOX2P30519 316 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 CDK8P49336 464 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 RPL26P61254 145 aaKnown RBP10.53□□□□□ -0.72
ZNF540-203ENST00000586134 PNOCQ13519 176 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 RASA2Q15283 850 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 C6orf183Q5T699 404 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 CDKAL1Q5VV42 579 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 PPP2R2DQ66LE6 453 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 SIGIRRQ6IA17 410 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 TMTC3Q6ZXV5 915 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 HS2ST1Q7LGA3 356 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 MB21D1Q8N884 522 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 ACER1Q8TDN7 264 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 DPF3Q92784 378 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 NUP88Q99567 741 aaPredicted RBP10.53□□□□□ -0.72
ZNF540-203ENST00000586134 VTA1Q9NP79 307 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 PAK6Q9NQU5 681 aaPredicted RBP10.53□□□□□ -0.72
ZNF540-203ENST00000586134 INTS9Q9NV88 658 aaKnown RBP10.53□□□□□ -0.72
ZNF540-203ENST00000586134 GID8Q9NWU2 228 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 PCSK1NQ9UHG2 260 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 STX8Q9UNK0 236 aa10.53□□□□□ -0.72
ZNF540-203ENST00000586134 UMODL1Q5DID0 1318 aa10.52□□□□□ -0.72
ZNF540-203ENST00000586134 GSG1L2A8MUP6 293 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 TUFMP49411 452 aaKnown RBP10.52□□□□□ -0.73
ZNF540-203ENST00000586134 KIF11P52732 1056 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 BASP1P80723 227 aaKnown RBP10.52□□□□□ -0.73
ZNF540-203ENST00000586134 DR1Q01658 176 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 PFKPQ01813 784 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 SPAG1Q07617 926 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 MORC3Q14149 939 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 GRM2Q14416 872 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 MTFR1Q15390 333 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 MYLK3Q32MK0 819 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 ZC2HC1CQ53FD0 456 aaPredicted RBP10.52□□□□□ -0.73
ZNF540-203ENST00000586134 C1orf228Q6PIY5 440 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 DCLK2Q8N568 766 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 OR7G1Q8NGA0 311 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 PYROXD1Q8WU10 500 aa10.52□□□□□ -0.73
ZNF540-203ENST00000586134 CASKIN2Q8WXE0 1202 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms