RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 ZNF568Q3ZCX4 644 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 H2AFVQ71UI9 128 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 ZBTB33Q86T24 672 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 NT5DC4Q86YG4 428 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 ARHGEF19Q8IW93 802 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 CEP112Q8N8E3 955 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 SLC30A5Q8TAD4 765 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 HELQQ8TDG4 1101 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 TAS1R2Q8TE23 839 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 NLRP7Q8WX94 980 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 TAF4BQ92750 862 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 SCLT1Q96NL6 688 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 AGPAT1Q99943 283 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 ADPGKQ9BRR6 497 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 GPR88Q9GZN0 384 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 ASB7Q9H672 318 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 RPF1Q9H9Y2 349 aaKnown RBP11.17□□□□□ -0.62
LIG3-203ENST00000585370 SETD4Q9NVD3 440 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 CDC23Q9UJX2 597 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 AJAP1Q9UKB5 411 aaPredicted RBP11.17□□□□□ -0.62
LIG3-203ENST00000585370 JRKLQ9Y4A0 524 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 MRFAP1Q9Y605 127 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 NCOR1O75376 2440 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 C17orf102A2RUQ5 167 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 RCCD1A6NED2 376 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 ERLIN2O94905 339 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 TNNC2P02585 160 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 EDN1P05305 212 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 CYP2C9P11712 490 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 PIK3CAP42336 1068 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 ADAM17P78536 824 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 ADGRE1Q14246 886 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 ENOX2Q16206 610 aaKnown RBP11.16□□□□□ -0.62
LIG3-203ENST00000585370 WHAMMP3Q1A5X7 153 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 DCAF4L1Q3SXM0 396 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 PAPD7Q5XG87 772 aaKnown RBP11.16□□□□□ -0.62
LIG3-203ENST00000585370 PPP1R2P3Q6NXS1 205 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 ZNF677Q86XU0 584 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 MNS1Q8NEH6 495 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 PPP1R13LQ8WUF5 828 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 SCLYQ96I15 445 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 ANKRD36BP1Q96IX9 119 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 TSPAN18Q96SJ8 248 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 MTG1Q9BT17 334 aaPredicted RBP11.16□□□□□ -0.62
LIG3-203ENST00000585370 SYT11Q9BT88 431 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 IRX2Q9BZI1 471 aaPredicted RBP11.16□□□□□ -0.62
LIG3-203ENST00000585370 CDT1Q9H211 546 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 ADAMTS10Q9H324 1103 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 PRDM12Q9H4Q4 367 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 PRDM6Q9NQX0 595 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 TOPORSQ9NS56 1045 aaPredicted RBP11.16□□□□□ -0.62
LIG3-203ENST00000585370 MSRAQ9UJ68 235 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 NENFQ9UMX5 172 aa11.16□□□□□ -0.62
LIG3-203ENST00000585370 YBX2Q9Y2T7 364 aaKnown RBP11.16□□□□□ -0.62
LIG3-203ENST00000585370 A0A0U1RQJ8 604 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 A0A1B0GUA9 196 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 DDX3XO00571 662 aaKnown RBP eCLIP11.15□□□□□ -0.62
LIG3-203ENST00000585370 ABL1P00519 1130 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 VTNP04004 478 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 HARSP12081 509 aaKnown RBP11.15□□□□□ -0.62
LIG3-203ENST00000585370 MYOGP15173 224 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 HOXC8P31273 242 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 RABGGTBP53611 331 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 NAP1L1P55209 391 aaKnown RBP11.15□□□□□ -0.62
LIG3-203ENST00000585370 YWHAEP62258 255 aaKnown RBP11.15□□□□□ -0.62
LIG3-203ENST00000585370 TRPC3Q13507 836 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 NCOA4Q13772 614 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 RAB30Q15771 203 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 AMHR2Q16671 573 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 NBPF20Q3BBV1 942 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 TDRD10Q5VZ19 366 aaKnown RBP11.15□□□□□ -0.62
LIG3-203ENST00000585370 TAF2Q6P1X5 1199 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 THNSL1Q8IYQ7 743 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 RPUSD2Q8IZ73 545 aaKnown RBP11.15□□□□□ -0.62
LIG3-203ENST00000585370 C7orf31Q8N865 590 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 ATRIPQ8WXE1 791 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 TATDN2Q93075 761 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 KREMEN1Q96MU8 473 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 NKX2-4Q9H2Z4 354 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 FAM124BQ9H5Z6 455 aaPredicted RBP11.15□□□□□ -0.62
LIG3-203ENST00000585370 MINDY3Q9H8M7 445 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 PLEKHA5Q9HAU0 1116 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 BDP1A6H8Y1 2624 aa11.15□□□□□ -0.62
LIG3-203ENST00000585370 KAT6AQ92794 2004 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 SCN10AQ9Y5Y9 1956 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 MACROD2A1Z1Q3 448 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 ANKRD62A6NC57 917 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 TTLL13PA6NNM8 815 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 EFCAB8A8MWE9 144 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
LIG3-203ENST00000585370 RTN2O75298 545 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 GPR32O75388 356 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 VNN1O95497 513 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 TMEM191BP0C7N4 346 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 TMEM253P0C7T8 217 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 STAG3L1P0CL83 205 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 TCP1P17987 556 aaKnown RBP11.14□□□□□ -0.63
LIG3-203ENST00000585370 ARF4P18085 180 aaPredicted RBP11.14□□□□□ -0.63
LIG3-203ENST00000585370 ATICP31939 592 aa11.14□□□□□ -0.63
LIG3-203ENST00000585370 USP8P40818 1118 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms