RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 UNC13BO14795 1591 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 GALCP54803 685 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PCSK7Q16549 785 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 KYAT1Q16773 422 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CDR2LQ86X02 465 aaPredicted RBP13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PABPC5Q96DU9 382 aaKnown RBP13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 C16orf96A6NNT2 1141 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SLC16A3O15427 465 aaKnown RBP13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 NDUFS3O75489 264 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ZNF200P98182 395 aaPredicted RBP13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 GTF2H3Q13889 308 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 APPL2Q8NEU8 664 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 TUFT1Q9NNX1 390 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CHMP2BQ9UQN3 213 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PKP3Q9Y446 797 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 POLRMTO00411 1230 aaKnown RBP13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 MYL2P10916 166 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 TMEM143Q96AN5 459 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ERP27Q96DN0 273 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ARHGEF26Q96DR7 871 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 TSPAN17Q96FV3 270 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 DDX50Q9BQ39 737 aaKnown RBP13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 FBXO2Q9UK22 296 aaPredicted RBP13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PLA2R1Q13018 1463 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 NLRP1Q9C000 1473 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 KRT87PA6NCN2 255 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SUPT3HB4E1H0 165 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CDH16O75309 829 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 IMPDH2P12268 514 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 KCNA3P22001 575 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 STAT5BP51692 787 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 FAM162AQ96A26 154 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 STK33Q9BYT3 514 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ADGRA2Q96PE1 1338 aa13.91□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ZNF263O14978 683 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CYBBP04839 570 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PTK7Q13308 1070 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 NBPF20Q3BBV1 942 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 C16orf89Q6UX73 402 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SRBD1Q8N5C6 995 aaKnown RBP13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 TEX9Q8N6V9 391 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 RUBCNQ92622 972 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 SMARCAL1Q9NZC9 954 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 TRIM10Q9UDY6 481 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ITIH2P19823 946 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 MTM1Q13496 603 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ALX1Q15699 326 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 YAF2Q8IY57 180 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 TBC1D19Q8N5T2 526 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 WDR48Q8TAF3 677 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CD274Q9NZQ7 290 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 CDYLQ9Y232 598 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 GRAP2O75791 330 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 AGGF1Q8N302 714 aaeCLIP13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 EFHBQ8N7U6 833 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 FOPNLQ96NB1 174 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 KLF6Q99612 283 aaPredicted RBP13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 IL1RL2Q9HB29 575 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 EXOSC4Q9NPD3 245 aaKnown RBP13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 UVRAGQ9P2Y5 699 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 FAM47DPA6NHR8 397 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 AP3B1O00203 1094 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ORC4O43929 436 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 ZNF189O75820 626 aaPredicted RBP13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 DGKIO75912 1065 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 MAP3K7CLP57077 242 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 MFSD14CQ5VZR4 134 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 TMED8Q6PL24 325 aaPredicted RBP13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 KCNK16Q96T55 309 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 MTA3Q9BTC8 594 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 TRIM9Q9C026 710 aa13.9□□□□□ -0.18
RAB11FIP4-210ENST00000585058 PDGFRBP09619 1106 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 TRIP10Q15642 601 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SLC25A41Q8N5S1 370 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SHCBP1Q8NEM2 672 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 PLEKHA8Q96JA3 519 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SYNDIG1Q9H7V2 258 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 NARFQ9UHQ1 456 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 V9GYQ6 96 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 EEF2KO00418 725 aaKnown RBP13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 TXNP10599 105 aaKnown RBP13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 RPS6P62753 249 aaKnown RBP13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 UGP2Q16851 508 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 LRIG3Q6UXM1 1119 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SNX31Q8N9S9 440 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 C17orf80Q9BSJ5 609 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 STXBP3O00186 592 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 EIF3HO15372 352 aaKnown RBP eCLIP13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 FOXP2O15409 715 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 RARBP10826 455 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 FMR1Q06787 632 aaKnown RBP eCLIP13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 IL31Q6EBC2 164 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 TMEM154Q6P9G4 183 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 APOBEC3FQ8IUX4 373 aaKnown RBP13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 AGPAT5Q9NUQ2 364 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SLC30A1Q9Y6M5 507 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 CEP152O94986 1710 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 COL15A1P39059 1388 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 ROBO2Q9HCK4 1378 aa13.89□□□□□ -0.19
RAB11FIP4-210ENST00000585058 SERPINB9P50453 376 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms