RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 NDRG2Q9UN36 371 aaKnown RBP11.74□□□□□ -0.53
CSNK1D-226ENST00000585026 USP20Q9Y2K6 914 aa11.74□□□□□ -0.53
CSNK1D-226ENST00000585026 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.74□□□□□ -0.53
CSNK1D-226ENST00000585026 ZNF292O60281 2723 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 VPS37CA5D8V6 355 aaPredicted RBP11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 CCDC169A6NNP5 214 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 I3L4J1 428 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 ZNF263O14978 683 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 FOXD2O60548 495 aaPredicted RBP11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 MCF2P10911 925 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 CEBPBP17676 345 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 MARCKSP29966 332 aaPredicted RBP11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 FOSBP53539 338 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 ATXN1P54253 815 aaKnown RBP11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 RESTQ13127 1097 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 DMP1Q13316 513 aaPredicted RBP11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 GNL2Q13823 731 aaKnown RBP11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 ZNF174Q15697 407 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 SLC5A9Q2M3M2 681 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 CTXN3Q4LDR2 81 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 XKR4Q5GH76 650 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 FAM78AQ5JUQ0 283 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 ARID2Q68CP9 1835 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 LAIR1Q6GTX8 287 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 ZNF280DQ6N043 979 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 YAF2Q8IY57 180 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 FAM3CQ92520 227 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 SMARCD2Q92925 531 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 ASB16Q96NS5 453 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 KIFC3Q9BVG8 833 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 OXCT2Q9BYC2 517 aaPredicted RBP11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 PLA2G2FQ9BZM2 168 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 CXCL16Q9H2A7 254 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 TMEM134Q9H6X4 195 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 GOLGA2P5Q9HBQ8 144 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 AFF4Q9UHB7 1163 aaKnown RBP11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 INSL5Q9Y5Q6 135 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 NCOR2Q9Y618 2525 aa11.73□□□□□ -0.53
CSNK1D-226ENST00000585026 VPS13AQ96RL7 3174 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 WDR27A2RRH5 827 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 GOLGA6L22H0YM25 854 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 WNT7AO00755 349 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 LRP3O75074 770 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 KCNE1P15382 129 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 GDI1P31150 447 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 CXCL12P48061 93 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 TRAPPC10P48553 1259 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 MLLT6P55198 1093 aaPredicted RBP11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 OSTNP61366 133 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 PLD1Q13393 1074 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 LRRC32Q14392 662 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 GRM2Q14416 872 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 PRSS36Q5K4E3 855 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 TSSK4Q6SA08 328 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 CD300LGQ6UXG3 332 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 ALKAL1Q6UXT8 129 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 C3orf58Q8NDZ4 430 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 CSGALNACT1Q8TDX6 532 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 DRC1Q96MC2 740 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 ACO2Q99798 780 aaKnown RBP11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 CDT1Q9H211 546 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 FOXP1Q9H334 677 aaPredicted RBP11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 C17orf75Q9HAS0 396 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 LMAN1LQ9HAT1 526 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 ZNF334Q9HCZ1 680 aaPredicted RBP11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 ASAH2Q9NR71 780 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 LRWD1Q9UFC0 647 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 FBXL5Q9UKA1 691 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 NOL7Q9UMY1 257 aaKnown RBP11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 KIAA1024Q9UPX6 916 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 DNM3Q9UQ16 869 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 PIAS3Q9Y6X2 628 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 DMDP11532 3685 aa11.72□□□□□ -0.53
CSNK1D-226ENST00000585026 FANCMQ8IYD8 2048 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 EDN1P05305 212 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 RETP07949 1114 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 CPB1P15086 417 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 FCARP24071 287 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 U2AF2P26368 475 aaKnown RBP eCLIP11.71□□□□□ -0.539e-9■□□□□ 8.3
CSNK1D-226ENST00000585026 CNR2P34972 360 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 PEX3P56589 373 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 STRN3Q13033 797 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 FZD5Q13467 585 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 MRPL58Q14197 206 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 PDIA5Q14554 519 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 TTC38Q5R3I4 469 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 BRAPQ7Z569 592 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 MAP4K3Q8IVH8 894 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 MFSD6LQ8IWD5 586 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 FAM200AQ8TCP9 573 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 NETO1Q8TDF5 533 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 SUSD3Q96L08 255 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 TIPINQ9BVW5 301 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 SLITRK6Q9H5Y7 841 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 C8orf33Q9H7E9 229 aaPredicted RBP11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 TRPV4Q9HBA0 871 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 PTPRHQ9HD43 1115 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 KMT5AQ9NQR1 393 aa11.71□□□□□ -0.53
CSNK1D-226ENST00000585026 CNTN3Q9P232 1028 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms