RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 CXCL16Q9H2A7 254 aa15.02■□□□□ -0
UBBP4-202ENST00000584755 RNF39Q9H2S5 420 aa15.02■□□□□ -0
UBBP4-202ENST00000584755 FAM105AQ9NUU6 356 aa15.02■□□□□ -0
UBBP4-202ENST00000584755 NOCTQ9UK39 431 aaKnown RBP15.02■□□□□ -0
UBBP4-202ENST00000584755 PCDHB2Q9Y5E7 798 aa15.02■□□□□ -0
UBBP4-202ENST00000584755 TRIP11Q15643 1979 aa15.02□□□□□ -0.01
UBBP4-202ENST00000584755 CYP26A1O43174 497 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 ZNF623O75123 536 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 ITGB3P05106 788 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 MAGEA1P43355 309 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 NFX1Q12986 1120 aaKnown RBP15.01□□□□□ -0.01
UBBP4-202ENST00000584755 PAK2Q13177 524 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 NAB2Q15742 525 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 PKN2Q16513 984 aaKnown RBP15.01□□□□□ -0.01
UBBP4-202ENST00000584755 ZNF699Q32M78 642 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 ARHGAP29Q52LW3 1261 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 KIAA1328Q86T90 577 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 TXLNBQ8N3L3 684 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 LNX1Q8TBB1 728 aaPredicted RBP15.01□□□□□ -0.01
UBBP4-202ENST00000584755 LACRTQ9GZZ8 138 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 LUC7LQ9NQ29 371 aaKnown RBP15.01□□□□□ -0.01
UBBP4-202ENST00000584755 DPP3Q9NY33 737 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 NAGPAQ9UK23 515 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 SGPL1O95470 568 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 ABL1P00519 1130 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 CYP11B1P15538 503 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 ZSCAN20P17040 1043 aaPredicted RBP15.01□□□□□ -0.01
UBBP4-202ENST00000584755 CYP3A5P20815 502 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 AKAP5P24588 427 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 ASPAP45381 313 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 RAB27AP51159 221 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 ZNF132P52740 706 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 RBP5P82980 135 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 MBTPS1Q14703 1052 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 ALKBH5Q6P6C2 394 aaKnown RBP15.01□□□□□ -0.01
UBBP4-202ENST00000584755 NOP9Q86U38 636 aaKnown RBP15.01□□□□□ -0.01
UBBP4-202ENST00000584755 DDX1Q92499 740 aaKnown RBP15.01□□□□□ -0.01
UBBP4-202ENST00000584755 AGPAT1Q99943 283 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.01□□□□□ -0.01
UBBP4-202ENST00000584755 BCO2Q9BYV7 579 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 TSGA10Q9BZW7 698 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 FAM124BQ9H5Z6 455 aaPredicted RBP15.01□□□□□ -0.01
UBBP4-202ENST00000584755 LZTFL1Q9NQ48 299 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 MYO1AQ9UBC5 1043 aa15.01□□□□□ -0.01
UBBP4-202ENST00000584755 UBQLN1Q9UMX0 589 aaKnown RBP15.01□□□□□ -0.01
UBBP4-202ENST00000584755 SMIM28A0A1B0GU29 152 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 ANO9A1A5B4 782 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 KRT86O43790 486 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 MGEA5O60502 916 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 MYCP01106 439 aaPredicted RBP15□□□□□ -0.01
UBBP4-202ENST00000584755 CHRNB2P17787 502 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 POLR2BP30876 1174 aaKnown RBP15□□□□□ -0.01
UBBP4-202ENST00000584755 BPIFB4P59827 614 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 KIF5AQ12840 1032 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 FAM43BQ6ZT52 329 aaPredicted RBP15□□□□□ -0.01
UBBP4-202ENST00000584755 SLC47A2Q86VL8 602 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 GLYCTKQ8IVS8 523 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 HACE1Q8IYU2 909 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 BEST2Q8NFU1 509 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 U2AF1L4Q8WU68 220 aaKnown RBP15□□□□□ -0.01
UBBP4-202ENST00000584755 SLC20A1Q8WUM9 679 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 PARP2Q9UGN5 583 aa15□□□□□ -0.01
UBBP4-202ENST00000584755 A0A0U1RQF3 1178 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 XPOTO43592 962 aaKnown RBP14.99□□□□□ -0.01
UBBP4-202ENST00000584755 KRT19P08727 400 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 COL6A1P12109 1028 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 KRT5P13647 590 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 SELPP16109 830 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 TNFAIP3P21580 790 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 USP8P40818 1118 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 PDE6CP51160 858 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 GUCY2FP51841 1108 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 CDR2Q01850 454 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 BFSP2Q13515 415 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 ZNF667Q5HYK9 610 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 DNTTIP2Q5QJE6 756 aaKnown RBP14.99□□□□□ -0.01
UBBP4-202ENST00000584755 CCDC122Q5T0U0 273 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 C1orf53Q5VUE5 145 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.99□□□□□ -0.01
UBBP4-202ENST00000584755 ANKRD33Q7Z3H0 272 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 ZNF677Q86XU0 584 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 TMEM130Q8N3G9 435 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 LRRC52Q8N7C0 313 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 HPDLQ96IR7 371 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 APOL6Q9BWW8 343 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 TRIM10Q9UDY6 481 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 TUBGCP4Q9UGJ1 667 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 INTUQ9ULD6 942 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 AGAP1Q9UPQ3 857 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 GIT1Q9Y2X7 761 aa14.99□□□□□ -0.01
UBBP4-202ENST00000584755 BTNL10A8MVZ5 291 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 PTGESO14684 152 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 FANCGO15287 622 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 KIF5CO60282 957 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 GZMAP12544 262 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 SKIP12755 728 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 ITGA4P13612 1032 aa14.98□□□□□ -0.01
UBBP4-202ENST00000584755 YWHAEP62258 255 aaKnown RBP14.98□□□□□ -0.01
UBBP4-202ENST00000584755 FMO1Q01740 532 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms