RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	HRG	P04196	525 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	HLA-DOA	P06340	250 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TRIM27	P14373	513 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PDC	P20941	246 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ECHS1	P30084	290 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CRHR1	P34998	444 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CACNB3	P54284	484 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	RAP2B	P61225	183 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	FSTL1	Q12841	308 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PICALM	Q13492	652 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SEPT2	Q15019	361 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	MST1L	Q2TV78	715 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	LONRF3	Q496Y0	759 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	NAIF1	Q69YI7	327 aa	Predicted RBP	4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	EFCAB12	Q6NXP0	572 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754		Q6ZPA2	131 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	MRGPRE	Q86SM8	312 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TRMT2A	Q8IZ69	625 aa	Known RBP	4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	FAM43A	Q8N2R8	423 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CAMKK1	Q8N5S9	505 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SAMD3	Q8N6K7	520 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	OR10H5	Q8NGA6	315 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	OR2I1P	Q8NGU4	316 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ZFP28	Q8NHY6	868 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TFAP2C	Q92754	450 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	RAB24	Q969Q5	203 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	GABBR1	Q9UBS5	961 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SCOC	Q9UIL1	159 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	DNM3	Q9UQ16	869 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	MAP3K2	Q9Y2U5	619 aa		4.58	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CUL7	Q14999	1698 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	MAP3K4	Q9Y6R4	1608 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ANO9	A1A5B4	782 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TMEM191C	A6NGB0	347 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	DIRC3	C9JPN6	131 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TRIM24	O15164	1050 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TEX33	O43247	280 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	NCR1	O76036	304 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SPATA31D3	P0C874	917 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	RPL17	P18621	184 aa	Known RBP	4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	KRT4	P19013	534 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	FPR1	P21462	350 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SREBF1	P36956	1147 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PTPA	Q15257	358 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	BMT2	Q1RMZ1	405 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SPATA31D4	Q6ZUB0	917 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CHST15	Q7LFX5	561 aa	Predicted RBP	4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	DENND1C	Q8IV53	801 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PQLC1	Q8N2U9	271 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PRR18	Q8N4B5	295 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	RUNDC1	Q96C34	613 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CHFR	Q96EP1	664 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	LRGUK	Q96M69	825 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TAAR9	Q96RI9	348 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	NEU1	Q99519	415 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PRRX2	Q99811	253 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	MYOC	Q99972	504 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SARG	Q9BW04	601 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	REXO4	Q9GZR2	422 aa	Known RBP	4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TMEM60	Q9H2L4	133 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SLC12A5	Q9H2X9	1139 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ANKFY1	Q9P2R3	1169 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SIK3	Q9Y2K2	1263 aa		4.57	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ABCC2	Q92887	1545 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	KIAA0586	Q9BVV6	1533 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PLB1	Q6P1J6	1458 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	ATRNL1	Q5VV63	1379 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CXorf49	A8MYA2	514 aa	Predicted RBP	4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	NDUFA10	O95299	355 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	FTH1P19	P0C7X4	201 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	LAG3	P18627	525 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	SLC6A9	P48067	706 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CHN2	P52757	468 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	INHBC	P55103	352 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	FAM193A	P78312	1265 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	GPSM2	P81274	684 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	BIRC2	Q13490	618 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	UBE4A	Q14139	1066 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	RAB39A	Q14964	217 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TIGD2	Q4W5G0	525 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	PDCD4	Q53EL6	469 aa	Known RBP	4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	LY6G5C	Q5SRR4	150 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	AFMID	Q63HM1	303 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	LDLRAD3	Q86YD5	345 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	DRC7	Q8IY82	874 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	GRAMD1C	Q8IYS0	662 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	AMER2	Q8N7J2	671 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	OR7D4	Q8NG98	312 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CCHCR1	Q8TD31	782 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	DIS3L	Q8TF46	1054 aa	Known RBP	4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	HOXB13	Q92826	284 aa	Predicted RBP	4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	CDK5RAP3	Q96JB5	506 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	TTPAL	Q9BTX7	342 aa		4.56	□□□□□ -1.68
PPP4R1-229	ENST00000584754	BCO1	Q9HAY6	547 aa		4.56	□□□□□ -1.68

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