RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 RINT1Q6NUQ1 792 aa18.13■□□□□ 0.49
CCDC57-219ENST00000584717 PDZD4Q76G19 769 aaPredicted RBP18.13■□□□□ 0.49
CCDC57-219ENST00000584717 HS6ST3Q8IZP7 471 aa18.13■□□□□ 0.49
CCDC57-219ENST00000584717 TMEM130Q8N3G9 435 aa18.13■□□□□ 0.49
CCDC57-219ENST00000584717 ATRIPQ8WXE1 791 aa18.13■□□□□ 0.49
CCDC57-219ENST00000584717 SUSD3Q96L08 255 aa18.13■□□□□ 0.49
CCDC57-219ENST00000584717 NELL2Q99435 816 aa18.13■□□□□ 0.49
CCDC57-219ENST00000584717 BRD9Q9H8M2 597 aa18.13■□□□□ 0.49
CCDC57-219ENST00000584717 NDRG2Q9UN36 371 aaKnown RBP18.13■□□□□ 0.49
CCDC57-219ENST00000584717 RBM19Q9Y4C8 960 aaKnown RBP18.13■□□□□ 0.49
CCDC57-219ENST00000584717 PCDHGA2Q9Y5H1 932 aa18.13■□□□□ 0.49
CCDC57-219ENST00000584717 STK24Q9Y6E0 443 aa18.13■□□□□ 0.49
CCDC57-219ENST00000584717 ZNF197O14709 1029 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 NCAM2O15394 837 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 RPL9P32969 192 aaKnown RBP18.12■□□□□ 0.49
CCDC57-219ENST00000584717 ADCY1Q08828 1119 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 PUM1Q14671 1186 aaKnown RBP eCLIP18.12■□□□□ 0.49
CCDC57-219ENST00000584717 ZRSR1Q15695 479 aaKnown RBP18.12■□□□□ 0.49
CCDC57-219ENST00000584717 IL17AQ16552 155 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 TPGS2Q68CL5 300 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 ZNF280DQ6N043 979 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 C1orf186Q6ZWK4 172 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 DNASE1L2Q92874 299 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 TBC1D32Q96NH3 1257 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 ZFP14Q9HCL3 533 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 ZSCAN32Q9NX65 697 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 TUBGCP4Q9UGJ1 667 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 MRPS17Q9Y2R5 130 aaKnown RBP18.12■□□□□ 0.49
CCDC57-219ENST00000584717 COL4A2P08572 1712 aa18.12■□□□□ 0.49
CCDC57-219ENST00000584717 TICRRQ7Z2Z1 1910 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 F5P12259 2224 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 CPB1P15086 417 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 GJA1P17302 382 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 U2AF2P26368 475 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCDC57-219ENST00000584717 RPS9P46781 194 aaKnown RBP18.11■□□□□ 0.49
CCDC57-219ENST00000584717 TWF1Q12792 350 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 STRN3Q13033 797 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 MTAPQ13126 283 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 FZD5Q13467 585 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 NOLC1Q14978 699 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCDC57-219ENST00000584717 RSPO4Q2I0M5 234 aaPredicted RBP18.11■□□□□ 0.49
CCDC57-219ENST00000584717 SLC10A6Q3KNW5 377 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 CYP4A22Q5TCH4 519 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 IQCEQ6IPM2 695 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 ELMOD1Q8N336 334 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 ZBTB44Q8NCP5 570 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 DDX12PQ92771 950 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 ZSWIM3Q96MP5 696 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 ASB16Q96NS5 453 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 MMTAG2Q9BU76 263 aaKnown RBP18.11■□□□□ 0.49
CCDC57-219ENST00000584717 TRMT61BQ9BVS5 477 aaKnown RBP18.11■□□□□ 0.49
CCDC57-219ENST00000584717 CEP72Q9P209 647 aa18.11■□□□□ 0.49
CCDC57-219ENST00000584717 SMG5Q9UPR3 1016 aaKnown RBP18.11■□□□□ 0.49
CCDC57-219ENST00000584717 MYH11P35749 1972 aa18.1■□□□□ 0.49
CCDC57-219ENST00000584717 MOSPD3O75425 235 aa18.1■□□□□ 0.49
CCDC57-219ENST00000584717 MYL4P12829 197 aa18.1■□□□□ 0.49
CCDC57-219ENST00000584717 GDI1P31150 447 aa18.1■□□□□ 0.49
CCDC57-219ENST00000584717 SPAG1Q07617 926 aa18.1■□□□□ 0.49
CCDC57-219ENST00000584717 VITQ6UXI7 678 aa18.1■□□□□ 0.49
CCDC57-219ENST00000584717 DTHD1Q6ZMT9 781 aa18.1■□□□□ 0.49
CCDC57-219ENST00000584717 RNF19BQ6ZMZ0 732 aa18.1■□□□□ 0.49
CCDC57-219ENST00000584717 APPL2Q8NEU8 664 aa18.1■□□□□ 0.49
CCDC57-219ENST00000584717 ZSCAN31Q96LW9 406 aaPredicted RBP18.1■□□□□ 0.49
CCDC57-219ENST00000584717 ZNF512Q96ME7 567 aaPredicted RBP18.1■□□□□ 0.49
CCDC57-219ENST00000584717 C17orf75Q9HAS0 396 aa18.1■□□□□ 0.49
CCDC57-219ENST00000584717 PRMT8Q9NR22 394 aaPredicted RBP18.1■□□□□ 0.49
CCDC57-219ENST00000584717 DLL3Q9NYJ7 618 aa18.1■□□□□ 0.49
CCDC57-219ENST00000584717 AFF4Q9UHB7 1163 aaKnown RBP18.1■□□□□ 0.49
CCDC57-219ENST00000584717 PCDHB8Q9UN66 801 aa18.1■□□□□ 0.49
CCDC57-219ENST00000584717 NCANO14594 1321 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 EIF5BO60841 1220 aaKnown RBP18.09■□□□□ 0.49
CCDC57-219ENST00000584717 TOM1L1O75674 476 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 MICAL2O94851 1124 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 CXCL8P10145 99 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 GUCY2CP25092 1073 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 VIPR2P41587 438 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 MATR3P43243 847 aaKnown RBP eCLIP18.09■□□□□ 0.49
CCDC57-219ENST00000584717 ZNF687Q8N1G0 1237 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 TMEM161BQ8NDZ6 487 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 NELL1Q92832 810 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 SMARCD2Q92925 531 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 PLIN2Q99541 437 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 EPC1Q9H2F5 836 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 ZNF334Q9HCZ1 680 aaPredicted RBP18.09■□□□□ 0.49
CCDC57-219ENST00000584717 ASAH2Q9NR71 780 aa18.09■□□□□ 0.49
CCDC57-219ENST00000584717 TIMM13Q9Y5L4 95 aaPredicted RBP18.09■□□□□ 0.49
CCDC57-219ENST00000584717 LAD1O00515 517 aa18.08■□□□□ 0.48
CCDC57-219ENST00000584717 MAN2B1O00754 1011 aa18.08■□□□□ 0.48
CCDC57-219ENST00000584717 LILRB5O75023 590 aa18.08■□□□□ 0.48
CCDC57-219ENST00000584717 OR4Q2P0C623 313 aa18.08■□□□□ 0.48
CCDC57-219ENST00000584717 MAPTP10636 758 aaKnown RBP18.08■□□□□ 0.48
CCDC57-219ENST00000584717 PLS3P13797 630 aa18.08■□□□□ 0.48
CCDC57-219ENST00000584717 PSMC3P17980 439 aa18.08■□□□□ 0.48
CCDC57-219ENST00000584717 MARCKSP29966 332 aaPredicted RBP18.08■□□□□ 0.48
CCDC57-219ENST00000584717 PRPHP41219 470 aa18.08■□□□□ 0.48
CCDC57-219ENST00000584717 TEAD2Q15562 447 aa18.08■□□□□ 0.48
CCDC57-219ENST00000584717 ZSCAN18Q8TBC5 510 aaPredicted RBP18.08■□□□□ 0.48
CCDC57-219ENST00000584717 SPIRE2Q8WWL2 714 aa18.08■□□□□ 0.48
CCDC57-219ENST00000584717 IRF7Q92985 503 aa18.08■□□□□ 0.48
CCDC57-219ENST00000584717 BORCS6Q96GS4 357 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms