RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 ZNF197O14709 1029 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 TBX3O15119 743 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 RECQL4O94761 1208 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 SEC24AO95486 1093 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 TOP3BO95985 862 aaKnown RBP11.23□□□□□ -0.61
GGA3-219ENST00000584550 MYL4P12829 197 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 ARL2P36404 184 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 BRCC3P46736 316 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 CLCNKBP51801 687 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 ROR1Q01973 937 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 SPIRE1Q08AE8 756 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 LRRC32Q14392 662 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 EPHA7Q15375 998 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 NAB2Q15742 525 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 GLRA4Q5JXX5 417 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 CYP4A22Q5TCH4 519 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 MCTP1Q6DN14 999 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 TCEAL6Q6IPX3 200 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 TXNDC11Q6PKC3 985 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
GGA3-219ENST00000584550 ZNF461Q8TAF7 563 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 ZSCAN18Q8TBC5 510 aaPredicted RBP11.23□□□□□ -0.61
GGA3-219ENST00000584550 TCEAL3Q969E4 200 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
GGA3-219ENST00000584550 ZSWIM4Q9H7M6 989 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 TRPV5Q9NQA5 729 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 AVENQ9NQS1 362 aaPredicted RBP11.23□□□□□ -0.61
GGA3-219ENST00000584550 GDAQ9Y2T3 454 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.23□□□□□ -0.61
GGA3-219ENST00000584550 AKAP13Q12802 2813 aa11.23□□□□□ -0.61
GGA3-219ENST00000584550 ARHGEF37A1IGU5 675 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 LRRIQ4A6NIV6 560 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 HEPACAM2A8MVW5 462 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 H3BQV1 296 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 PRKCBP05771 671 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 CCDC192P0DO97 292 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 GCFC2P16383 781 aaKnown RBP11.22□□□□□ -0.61
GGA3-219ENST00000584550 LIG1P18858 919 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
GGA3-219ENST00000584550 NOVA1P51513 510 aaKnown RBP11.22□□□□□ -0.61
GGA3-219ENST00000584550 POU5F1BQ06416 359 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 PON2Q15165 354 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 TEAD2Q15562 447 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 RNF43Q68DV7 783 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 MOXD1Q6UVY6 613 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 CD300LGQ6UXG3 332 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 ANKS3Q6ZW76 656 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 RTL10Q7L3V2 364 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 CACNA2D4Q7Z3S7 1137 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 WDR5BQ86VZ2 330 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 MFSD6LQ8IWD5 586 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 YAF2Q8IY57 180 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 KDF1Q8NAX2 398 aaPredicted RBP11.22□□□□□ -0.61
GGA3-219ENST00000584550 RSPRY1Q96DX4 576 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 FAM20AQ96MK3 541 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 NAP1L4Q99733 375 aaKnown RBP11.22□□□□□ -0.61
GGA3-219ENST00000584550 POLR3FQ9H1D9 316 aaPredicted RBP11.22□□□□□ -0.61
GGA3-219ENST00000584550 SLITRK6Q9H5Y7 841 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 GOLGA2P5Q9HBQ8 144 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 BACE2Q9Y5Z0 518 aa11.22□□□□□ -0.61
GGA3-219ENST00000584550 SRRM3A6NNA2 597 aaPredicted RBP11.21□□□□□ -0.61
GGA3-219ENST00000584550 K7ELQ4 463 aaPredicted RBP11.21□□□□□ -0.61
GGA3-219ENST00000584550 ARNTLO00327 626 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 WNT7AO00755 349 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 EXTL3O43909 919 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 MOSPD3O75425 235 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 RPP40O75818 363 aaKnown RBP11.21□□□□□ -0.61
GGA3-219ENST00000584550 ABLIM3O94929 683 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 SLITRK3O94933 977 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 EPN2O95208 641 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 PAPSS2O95340 614 aaPredicted RBP11.21□□□□□ -0.61
GGA3-219ENST00000584550 RING1Q06587 406 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 LARP1BQ659C4 914 aaKnown RBP11.21□□□□□ -0.61
GGA3-219ENST00000584550 PPP4R3AQ6IN85 833 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 LRSAM1Q6UWE0 723 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 POTEDQ86YR6 584 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 C3orf58Q8NDZ4 430 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 FAM200AQ8TCP9 573 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 DEPDC1BQ8WUY9 529 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 GAB3Q8WWW8 586 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 HAS1Q92839 578 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 ZFYVE19Q96K21 471 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 ZNF512Q96ME7 567 aaPredicted RBP11.21□□□□□ -0.61
GGA3-219ENST00000584550 CCDC43Q96MW1 224 aaKnown RBP11.21□□□□□ -0.61
GGA3-219ENST00000584550 FOXP1Q9H334 677 aaPredicted RBP11.21□□□□□ -0.61
GGA3-219ENST00000584550 PDZD7Q9H5P4 517 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 KCNMB3Q9NPA1 279 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 GPRC5CQ9NQ84 441 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 GTSE1Q9NYZ3 720 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 INSL5Q9Y5Q6 135 aa11.21□□□□□ -0.61
GGA3-219ENST00000584550 IGF2RP11717 2491 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 DSPP15924 2871 aaKnown RBP11.2□□□□□ -0.62
GGA3-219ENST00000584550 ZMYM2Q9UBW7 1377 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 C4orf47A7E2U8 309 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 SPECC1L-ADORA2AF8WAN1 911 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 TRAPPC3O43617 180 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 DGAT1O75907 488 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 MICAL2O94851 1124 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 BAG4O95429 457 aaKnown RBP11.2□□□□□ -0.62
GGA3-219ENST00000584550 ATF2P15336 505 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms