RNA–Protein interactions for RNA: ENST00000584192.5

NARF-223, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-223	ENST00000584192	RNF168	Q8IYW5	571 aa	Predicted RBP	15.73	■□□□□ 0.11
NARF-223	ENST00000584192	CCDC127	Q96BQ5	260 aa		15.73	■□□□□ 0.11
NARF-223	ENST00000584192	VN1R3	Q9BXE9	311 aa		15.73	■□□□□ 0.11
NARF-223	ENST00000584192	GPR62	Q9BZJ7	368 aa		15.73	■□□□□ 0.11
NARF-223	ENST00000584192	SSX2IP	Q9Y2D8	614 aa		15.73	■□□□□ 0.11
NARF-223	ENST00000584192	R3HCC1	Q9Y3T6	440 aa	Known RBP	15.73	■□□□□ 0.11
NARF-223	ENST00000584192	TRIM49B	A6NDI0	452 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	CXCL14	O95715	111 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	EFEMP2	O95967	443 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	TNNC2	P02585	160 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	EPB41	P11171	864 aa	Known RBP	15.72	■□□□□ 0.11
NARF-223	ENST00000584192	KRT13	P13646	458 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	PAX3	P23760	479 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	PSMC2	P35998	433 aa	Known RBP	15.72	■□□□□ 0.11
NARF-223	ENST00000584192	GLUD2	P49448	558 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	CASP4	P49662	377 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	STX17	P56962	302 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	FAM171A1	Q5VUB5	890 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	C9orf57	Q5W0N0	161 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	FOXR2	Q6PJQ5	311 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	INTS8	Q75QN2	995 aa	Known RBP	15.72	■□□□□ 0.11
NARF-223	ENST00000584192	FAM186B	Q8IYM0	893 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	C3orf58	Q8NDZ4	430 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	CGRRF1	Q99675	332 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	MKNK1	Q9BUB5	465 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	MTMR12	Q9C0I1	747 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	MRPL17	Q9NRX2	175 aa	Known RBP	15.72	■□□□□ 0.11
NARF-223	ENST00000584192	INTS13	Q9NVM9	706 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	RWDD2A	Q9UIY3	292 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	ITGA11	Q9UKX5	1188 aa		15.72	■□□□□ 0.11
NARF-223	ENST00000584192	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	15.71	■□□□□ 0.11
NARF-223	ENST00000584192	AKAP3	O75969	853 aa		15.71	■□□□□ 0.11
NARF-223	ENST00000584192	AP3M2	P53677	418 aa		15.71	■□□□□ 0.11
NARF-223	ENST00000584192	PMS1	P54277	932 aa	Known RBP	15.71	■□□□□ 0.11
NARF-223	ENST00000584192	DSG1	Q02413	1049 aa		15.71	■□□□□ 0.11
NARF-223	ENST00000584192	TCEAL5	Q5H9L2	206 aa		15.71	■□□□□ 0.11
NARF-223	ENST00000584192	LMBRD2	Q68DH5	695 aa	Predicted RBP	15.71	■□□□□ 0.11
NARF-223	ENST00000584192	CD300LG	Q6UXG3	332 aa		15.71	■□□□□ 0.11
NARF-223	ENST00000584192	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	15.71	■□□□□ 0.11
NARF-223	ENST00000584192	MRPL43	Q8N983	215 aa	Known RBP	15.71	■□□□□ 0.11
NARF-223	ENST00000584192	MAFA	Q8NHW3	353 aa	Predicted RBP	15.71	■□□□□ 0.11
NARF-223	ENST00000584192	PARD3B	Q8TEW8	1205 aa		15.71	■□□□□ 0.11
NARF-223	ENST00000584192	PPM1E	Q8WY54	764 aa		15.71	■□□□□ 0.11
NARF-223	ENST00000584192	ZNF560	Q96MR9	790 aa		15.71	■□□□□ 0.11
NARF-223	ENST00000584192	BPIFA3	Q9BQP9	254 aa		15.71	■□□□□ 0.11
NARF-223	ENST00000584192	TTPAL	Q9BTX7	342 aa		15.71	■□□□□ 0.11
NARF-223	ENST00000584192	TLE6	Q9H808	572 aa		15.71	■□□□□ 0.11
NARF-223	ENST00000584192	IRAK3	Q9Y616	596 aa		15.71	■□□□□ 0.11
NARF-223	ENST00000584192	BRWD1	Q9NSI6	2320 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	ANO9	A1A5B4	782 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	FSD2	A1L4K1	749 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	C2orf71	A6NGG8	1288 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	PIR	O00625	290 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	C2CD2L	O14523	706 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	SLC16A3	O15427	465 aa	Known RBP	15.7	■□□□□ 0.1
NARF-223	ENST00000584192	ITGB3	P05106	788 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	KRT19	P08727	400 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	PNPLA4	P41247	253 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	BRCC3	P46736	316 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	RBP5	P82980	135 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	ENPEP	Q07075	957 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	PTPN14	Q15678	1187 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	CCDC85B	Q15834	202 aa	Predicted RBP	15.7	■□□□□ 0.1
NARF-223	ENST00000584192	TPD52L1	Q16890	204 aa	Predicted RBP	15.7	■□□□□ 0.1
NARF-223	ENST00000584192	TTI2	Q6NXR4	508 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	PDXDC1	Q6P996	788 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	TAS1R1	Q7RTX1	841 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	CEP57	Q86XR8	500 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	ZC3H3	Q8IXZ2	948 aa	Known RBP	15.7	■□□□□ 0.1
NARF-223	ENST00000584192	GPR65	Q8IYL9	337 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	TMEM130	Q8N3G9	435 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	CSGALNACT2	Q8N6G5	542 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	AOPEP	Q8N6M6	819 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	C1orf127	Q8N9H9	656 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	OR5B17	Q8NGF7	314 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	FAM200A	Q8TCP9	573 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	TMC2	Q8TDI7	906 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	AUTS2	Q8WXX7	1259 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	SUSD3	Q96L08	255 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	CEP63	Q96MT8	703 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	POP1	Q99575	1024 aa	Known RBP	15.7	■□□□□ 0.1
NARF-223	ENST00000584192	CBX8	Q9HC52	389 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	CHST7	Q9NS84	486 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	PCDHGC5	Q9Y5F6	944 aa		15.7	■□□□□ 0.1
NARF-223	ENST00000584192	PTPRJ	Q12913	1337 aa		15.69	■□□□□ 0.1
NARF-223	ENST00000584192	ARHGEF37	A1IGU5	675 aa		15.69	■□□□□ 0.1
NARF-223	ENST00000584192	LRRIQ3	A6PVS8	624 aa	Predicted RBP	15.69	■□□□□ 0.1
NARF-223	ENST00000584192	SMTNL1	A8MU46	457 aa		15.69	■□□□□ 0.1
NARF-223	ENST00000584192	HIDE1	A8MVS5	230 aa		15.69	■□□□□ 0.1
NARF-223	ENST00000584192	BECN2	A8MW95	431 aa		15.69	■□□□□ 0.1
NARF-223	ENST00000584192		I3L4J1	428 aa		15.69	■□□□□ 0.1
NARF-223	ENST00000584192	PPEF2	O14830	753 aa		15.69	■□□□□ 0.1
NARF-223	ENST00000584192	SYN3	O14994	580 aa		15.69	■□□□□ 0.1
NARF-223	ENST00000584192	NCK2	O43639	380 aa		15.69	■□□□□ 0.1
NARF-223	ENST00000584192	FGFR1OP	O95684	399 aa	Known RBP	15.69	■□□□□ 0.1
NARF-223	ENST00000584192	IGFBP6	P24592	240 aa	Predicted RBP	15.69	■□□□□ 0.1
NARF-223	ENST00000584192	POLR2B	P30876	1174 aa	Known RBP	15.69	■□□□□ 0.1
NARF-223	ENST00000584192	TAF6	P49848	677 aa		15.69	■□□□□ 0.1
NARF-223	ENST00000584192	VAMP7	P51809	220 aa		15.69	■□□□□ 0.1
NARF-223	ENST00000584192	LILRA4	P59901	499 aa		15.69	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms