RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 AFF1P51825 1210 aaKnown RBP12.26□□□□□ -0.45
CCDC47-206ENST00000584112 PTGDRQ13258 359 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 NBR1Q14596 966 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 MAPK6Q16659 721 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 TMEM132AQ24JP5 1023 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 RSPO2Q6UXX9 243 aaPredicted RBP12.26□□□□□ -0.45
CCDC47-206ENST00000584112 COLGALT2Q8IYK4 626 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 CHCHD4Q8N4Q1 142 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 C4orf32Q8N8J7 132 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 IGSF22Q8N9C0 903 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 DEPTORQ8TB45 409 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 MDM1Q8TC05 714 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 KIFAP3Q92845 792 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 IFT74Q96LB3 600 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 RPS6KC1Q96S38 1066 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 APOL6Q9BWW8 343 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 VN1R3Q9BXE9 311 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 NXF3Q9H4D5 531 aaKnown RBP12.26□□□□□ -0.45
CCDC47-206ENST00000584112 MRPL17Q9NRX2 175 aaKnown RBP12.26□□□□□ -0.45
CCDC47-206ENST00000584112 HES2Q9Y543 173 aa12.26□□□□□ -0.45
CCDC47-206ENST00000584112 RELNP78509 3460 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 SPAARA0A1B0GVQ0 90 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 ATXN7O15265 892 aaPredicted RBP12.25□□□□□ -0.45
CCDC47-206ENST00000584112 RFPL2O75678 378 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 SOD2P04179 222 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 PRKCBP05771 671 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 URODP06132 367 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 PRPHP41219 470 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 TOB1P50616 345 aaPredicted RBP12.25□□□□□ -0.45
CCDC47-206ENST00000584112 DSC1Q08554 894 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 GRIK3Q13003 919 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 PRPF4BQ13523 1007 aaKnown RBP12.25□□□□□ -0.45
CCDC47-206ENST00000584112 PPP2R5DQ14738 602 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 RILPL1Q5EBL4 403 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 DAB2IPQ5VWQ8 1189 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 KRT79Q5XKE5 535 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 MCTP1Q6DN14 999 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 ZNF687Q8N1G0 1237 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 SNX29Q8TEQ0 813 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 TMX3Q96JJ7 454 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 ZFP42Q96MM3 310 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 ADPGKQ9BRR6 497 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 HERC2P3Q9BVR0 1158 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 COLEC11Q9BWP8 271 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 BHMT2Q9H2M3 363 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 FZD8Q9H461 694 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 SCUBE2Q9NQ36 999 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 KIAA1024Q9UPX6 916 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 PRG3Q9Y2Y8 225 aaPredicted RBP12.25□□□□□ -0.45
CCDC47-206ENST00000584112 PCDHB6Q9Y5E3 794 aa12.25□□□□□ -0.45
CCDC47-206ENST00000584112 ATMQ13315 3056 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 NBPF19A0A087WUL8 3843 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 COL6A6A6NMZ7 2263 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 H3BQV1 296 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 ACKR2O00590 384 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 NTRK1P04629 796 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 SSBP05455 408 aaKnown RBP eCLIP12.24□□□□□ -0.45
CCDC47-206ENST00000584112 CSRP1P21291 193 aaKnown RBP12.24□□□□□ -0.45
CCDC47-206ENST00000584112 AKAP5P24588 427 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 KLRC2P26717 231 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 MPLP40238 635 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 CCR3P51677 355 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 EFNA5P52803 228 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 KCNC4Q03721 635 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 ELMSAN1Q6PJG2 1045 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 DTHD1Q6ZMT9 781 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 APBB1IPQ7Z5R6 666 aaPredicted RBP12.24□□□□□ -0.45
CCDC47-206ENST00000584112 KBTBD6Q86V97 674 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 LONP2Q86WA8 852 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 CDR2LQ86X02 465 aaPredicted RBP12.24□□□□□ -0.45
CCDC47-206ENST00000584112 BSNDQ8WZ55 320 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 NELL2Q99435 816 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 CCDC86Q9H6F5 360 aaKnown RBP12.24□□□□□ -0.45
CCDC47-206ENST00000584112 MAN1C1Q9NR34 630 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.24□□□□□ -0.45
CCDC47-206ENST00000584112 DDX19AQ9NUU7 478 aaKnown RBP12.24□□□□□ -0.45
CCDC47-206ENST00000584112 MARCH5Q9NX47 278 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 MIOSQ9NXC5 875 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 PARP2Q9UGN5 583 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 PLXNB3Q9ULL4 1909 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 DNM3Q9UQ16 869 aa12.24□□□□□ -0.45
CCDC47-206ENST00000584112 PHLPP2Q6ZVD8 1323 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 LILRB3O75022 631 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 ADH1AP07327 375 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 CNPP09543 421 aaKnown RBP12.23□□□□□ -0.45
CCDC47-206ENST00000584112 GJB2P29033 226 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 CNR2P34972 360 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 CXCL12P48061 93 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 GLUD2P49448 558 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 GAS6Q14393 721 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 ECM1Q16610 540 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 DCAF4L1Q3SXM0 396 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 ZNF852Q6ZMS4 543 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 KCTD17Q8N5Z5 321 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 CMASQ8NFW8 434 aaPredicted RBP12.23□□□□□ -0.45
CCDC47-206ENST00000584112 SMG7Q92540 1137 aaKnown RBP12.23□□□□□ -0.45
CCDC47-206ENST00000584112 CCDC113Q9H0I3 377 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 PDZD7Q9H5P4 517 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 HEBP1Q9NRV9 189 aa12.23□□□□□ -0.45
CCDC47-206ENST00000584112 DPP7Q9UHL4 492 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms