RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 IGFBP6P24592 240 aaPredicted RBP10.75□□□□□ -0.69
SKA2-208ENST00000583927 TKTP29401 623 aaKnown RBP10.75□□□□□ -0.69
SKA2-208ENST00000583927 OR1D2P34982 312 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 BRCC3P46736 316 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 ME1P48163 572 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 ZXDAP98168 799 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 DNM1Q05193 864 aaKnown RBP10.75□□□□□ -0.69
SKA2-208ENST00000583927 PTPN21Q16825 1174 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 VARS2Q5ST30 1063 aaKnown RBP10.75□□□□□ -0.69
SKA2-208ENST00000583927 ZBTB41Q5SVQ8 909 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 KANK3Q6NY19 840 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 CRELD2Q6UXH1 353 aaPredicted RBP10.75□□□□□ -0.69
SKA2-208ENST00000583927 CCDC149Q6ZUS6 474 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 STXBP4Q6ZWJ1 553 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 UBALD2Q8IYN6 164 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 TDRD5Q8NAT2 981 aaKnown RBP10.75□□□□□ -0.69
SKA2-208ENST00000583927 APPL2Q8NEU8 664 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 ZNF461Q8TAF7 563 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 POMGNT1Q8WZA1 660 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 STAMQ92783 540 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 FAM13BQ9NYF5 915 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 TUBGCP4Q9UGJ1 667 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 USP25Q9UHP3 1055 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 CDH22Q9UJ99 828 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 PCDHB8Q9UN66 801 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 ZDHHC9Q9Y397 364 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 NUB1Q9Y5A7 615 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 MUC6Q6W4X9 2439 aa10.75□□□□□ -0.69
SKA2-208ENST00000583927 FAM237AA0A1B0GTK4 181 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 PVALEFA0A1B0GWK0 134 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 ARHGEF37A1IGU5 675 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 PIRO00625 290 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 ADAM12O43184 909 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 RFPL2O75678 378 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 OAZ2O95190 189 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 MYL1P05976 194 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 TYMPP19971 482 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 CMA1P23946 247 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 ACOT2P49753 483 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 CASP5P51878 434 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 SNRPFP62306 86 aaKnown RBP10.74□□□□□ -0.69
SKA2-208ENST00000583927 KRT85P78386 507 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 SIGLEC14Q08ET2 396 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 KCNA1Q09470 495 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 TMEM132DQ14C87 1099 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 FOXD4L5Q5VV16 416 aaPredicted RBP10.74□□□□□ -0.69
SKA2-208ENST00000583927 TPGS2Q68CL5 300 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 RSPO2Q6UXX9 243 aaPredicted RBP10.74□□□□□ -0.69
SKA2-208ENST00000583927 UNC13DQ70J99 1090 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 EPM2AIP1Q7L775 607 aaPredicted RBP10.74□□□□□ -0.69
SKA2-208ENST00000583927 BEST2Q8NFU1 509 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 ZNF507Q8TCN5 953 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 FOXD4L4Q8WXT5 416 aaPredicted RBP10.74□□□□□ -0.69
SKA2-208ENST00000583927 SMG7Q92540 1137 aaKnown RBP10.74□□□□□ -0.69
SKA2-208ENST00000583927 NXPE3Q969Y0 559 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 DHX58Q96C10 678 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 SCAND2PQ9GZW5 306 aaPredicted RBP10.74□□□□□ -0.69
SKA2-208ENST00000583927 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.74□□□□□ -0.69
SKA2-208ENST00000583927 EPS15L1Q9UBC2 864 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 SORCS3Q9UPU3 1222 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 CDY1Q9Y6F8 540 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 ZFP37Q9Y6Q3 630 aaPredicted RBP10.74□□□□□ -0.69
SKA2-208ENST00000583927 CLUHO75153 1309 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 UBE4BO95155 1302 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 PTPRDP23468 1912 aa10.74□□□□□ -0.69
SKA2-208ENST00000583927 ZNF638Q14966 1978 aaKnown RBP10.74□□□□□ -0.69
SKA2-208ENST00000583927 TISP43B9A030 160 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 C8AP07357 584 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 WEE2P0C1S8 567 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 SLFN14P0C7P3 912 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 SPATA31D3P0C874 917 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 MYBP10242 640 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 ATF2P15336 505 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 MCM4P33991 863 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 LILRA4P59901 499 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 ROR1Q01973 937 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 BECN1Q14457 450 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 LIN9Q5TKA1 542 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 JADE1Q6IE81 842 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 ZNF280DQ6N043 979 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 TRIM67Q6ZTA4 783 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 SPATA31D4Q6ZUB0 917 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 GLYCTKQ8IVS8 523 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 BRSK2Q8IWQ3 736 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 TCEAL8Q8IYN2 117 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 SPRYD3Q8NCJ5 442 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 FEZF2Q8TBJ5 459 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 TMEM174Q8WUU8 243 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 LEO1Q8WVC0 666 aaPredicted RBP10.73□□□□□ -0.69
SKA2-208ENST00000583927 KCNH6Q9H252 994 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 AVENQ9NQS1 362 aaPredicted RBP10.73□□□□□ -0.69
SKA2-208ENST00000583927 TBC1D7Q9P0N9 293 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 IGSF9Q9P2J2 1179 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 CGNQ9P2M7 1197 aaKnown RBP10.73□□□□□ -0.69
SKA2-208ENST00000583927 KCNH3Q9ULD8 1083 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 HPSEQ9Y251 543 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 GREB1Q4ZG55 1949 aa10.73□□□□□ -0.69
SKA2-208ENST00000583927 OBSL1O75147 1896 aa10.72□□□□□ -0.69
SKA2-208ENST00000583927 NUP210Q8TEM1 1887 aaPredicted RBP10.72□□□□□ -0.69
SKA2-208ENST00000583927 WDR27A2RRH5 827 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms