RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 NEMFO60524 1076 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 MOSPD3O75425 235 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 EDN1P05305 212 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 SPATA31C1P0DKV0 1188 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 PMLP29590 882 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 MLLT6P55198 1093 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-215ENST00000583328 TWF1Q12792 350 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 PPP2R5AQ15172 486 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 CTXN3Q4LDR2 81 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 TPGS2Q68CL5 300 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 C1orf228Q6PIY5 440 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 PADI6Q6TGC4 694 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 CATSPER3Q86XQ3 398 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 FAM160A2Q8N612 972 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-215ENST00000583328 C12orf50Q8NA57 414 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-215ENST00000583328 LEMD2Q8NC56 503 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 FAM200AQ8TCP9 573 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 WASF1Q92558 559 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 E2F7Q96AV8 911 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 MSANTD3Q96H12 275 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 IFT74Q96LB3 600 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 KIFC3Q9BVG8 833 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 TRPV4Q9HBA0 871 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 TUFT1Q9NNX1 390 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 ASAH2Q9NR71 780 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 CEP72Q9P209 647 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 ORC3Q9UBD5 711 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-215ENST00000583328 FBXL5Q9UKA1 691 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 NUB1Q9Y5A7 615 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 ARHGEF35A5YM69 484 aa13.49□□□□□ -0.25
TOP3A-215ENST00000583328 K7ESF4 209 aa13.49□□□□□ -0.25
TOP3A-215ENST00000583328 PAPSS2O95340 614 aaPredicted RBP13.49□□□□□ -0.25
TOP3A-215ENST00000583328 SEC24BO95487 1268 aa13.49□□□□□ -0.25
TOP3A-215ENST00000583328 CYP11B2P19099 503 aa13.49□□□□□ -0.25
TOP3A-215ENST00000583328 SOX4Q06945 474 aaPredicted RBP13.49□□□□□ -0.25
TOP3A-215ENST00000583328 MRPL58Q14197 206 aaKnown RBP13.49□□□□□ -0.25
TOP3A-215ENST00000583328 TEAD2Q15562 447 aa13.49□□□□□ -0.25
TOP3A-215ENST00000583328 DGKKQ5KSL6 1271 aa13.49□□□□□ -0.25
TOP3A-215ENST00000583328 NT5DC1Q5TFE4 455 aa13.49□□□□□ -0.25
TOP3A-215ENST00000583328 MTMR9Q96QG7 549 aa13.49□□□□□ -0.25
TOP3A-215ENST00000583328 CCDC94Q9BW85 323 aaPredicted RBP13.49□□□□□ -0.25
TOP3A-215ENST00000583328 TM6SF1Q9BZW5 370 aa13.49□□□□□ -0.25
TOP3A-215ENST00000583328 GPR88Q9GZN0 384 aa13.49□□□□□ -0.25
TOP3A-215ENST00000583328 POLD4Q9HCU8 107 aa13.49□□□□□ -0.25
TOP3A-215ENST00000583328 TOPORSQ9NS56 1045 aaPredicted RBP13.49□□□□□ -0.25
TOP3A-215ENST00000583328 AFF4Q9UHB7 1163 aaKnown RBP13.49□□□□□ -0.25
TOP3A-215ENST00000583328 RALYQ9UKM9 306 aaKnown RBP13.49□□□□□ -0.25
TOP3A-215ENST00000583328 CNOT1A5YKK6 2376 aaKnown RBP13.49□□□□□ -0.25
TOP3A-215ENST00000583328 SLC38A8A6NNN8 435 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 K7ERI5 159 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 ARNTLO00327 626 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 CHADO15335 359 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 MED24O75448 989 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 GRM5P41594 1212 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 SOX9P48436 509 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 EFNA5P52803 228 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 LIMK1P53667 647 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 OSTNP61366 133 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 SF3A2Q15428 464 aaKnown RBP13.48□□□□□ -0.25
TOP3A-215ENST00000583328 Q6ZS52 159 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 WDR5BQ86VZ2 330 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 CEP120Q8N960 986 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 TTC8Q8TAM2 541 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 TNFRSF25Q93038 417 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 ARRDC1-AS1Q9H2J1 176 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 MAFFQ9ULX9 164 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 TNFSF13BQ9Y275 285 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 VWA8A3KMH1 1905 aa13.48□□□□□ -0.25
TOP3A-215ENST00000583328 NCANO14594 1321 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 WNT7AO00755 349 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 CPB1P15086 417 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 MARCKSP29966 332 aaPredicted RBP13.47□□□□□ -0.25
TOP3A-215ENST00000583328 RPL9P32969 192 aaKnown RBP13.47□□□□□ -0.25
TOP3A-215ENST00000583328 EPHA5P54756 1037 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 ANAPC15P60006 121 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 CCDC6Q16204 474 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 XKR4Q5GH76 650 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 ZNF280DQ6N043 979 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 ALKAL1Q6UXT8 129 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 GPIHBP1Q8IV16 184 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 APPL2Q8NEU8 664 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 ERMNQ8TAM6 284 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 SHKBP1Q8TBC3 707 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 ZMAT2Q96NC0 199 aaKnown RBP13.47□□□□□ -0.25
TOP3A-215ENST00000583328 POLR3CQ9BUI4 534 aaPredicted RBP13.47□□□□□ -0.25
TOP3A-215ENST00000583328 TMEM60Q9H2L4 133 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 C2orf42Q9NWW7 574 aa13.47□□□□□ -0.25
TOP3A-215ENST00000583328 ARID2Q68CP9 1835 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 A0A1W2PRU2 124 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 MYBPHLA2RUH7 354 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 BTBD18B2RXH4 712 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 SPECC1L-ADORA2AF8WAN1 911 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 DPYSL4O14531 572 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 TM4SF5O14894 197 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 PFKFB2O60825 505 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 ZNF806P0C7X5 589 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 HOXA6P31267 233 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 MCM4P33991 863 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 SHC2P98077 582 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms