RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 BIRC3Q13489 604 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 SHHQ15465 462 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 PTPN21Q16825 1174 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 C9orf50Q5SZB4 431 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.71□□□□□ -0.05
ITGB4-209ENST00000583327 TMCO2Q7Z6W1 182 aaPredicted RBP14.71□□□□□ -0.05
ITGB4-209ENST00000583327 HERC6Q8IVU3 1022 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 CMTR2Q8IYT2 770 aaKnown RBP14.71□□□□□ -0.05
ITGB4-209ENST00000583327 ABI1Q8IZP0 508 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 SP7Q8TDD2 431 aaPredicted RBP14.71□□□□□ -0.05
ITGB4-209ENST00000583327 TATDN2Q93075 761 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 TMEM175Q9BSA9 504 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 NAA15Q9BXJ9 866 aaKnown RBP14.71□□□□□ -0.05
ITGB4-209ENST00000583327 MRPL9Q9BYD2 267 aaKnown RBP14.71□□□□□ -0.05
ITGB4-209ENST00000583327 GANQ9H2C0 597 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 GOLGA2P5Q9HBQ8 144 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 APOBEC3GQ9HC16 384 aaKnown RBP14.71□□□□□ -0.05
ITGB4-209ENST00000583327 GCNT4Q9P109 453 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 INPP5FQ9Y2H2 1132 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 DAAM1Q9Y4D1 1078 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 SLC4A7Q9Y6M7 1214 aa14.71□□□□□ -0.05
ITGB4-209ENST00000583327 TRIP11Q15643 1979 aa14.71□□□□□ -0.06
ITGB4-209ENST00000583327 FNDC1Q4ZHG4 1894 aaPredicted RBP14.7□□□□□ -0.06
ITGB4-209ENST00000583327 TBKBP1A7MCY6 615 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 TMEM189-UBE2V1I3L0A0 370 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 PES1O00541 588 aaKnown RBP14.7□□□□□ -0.06
ITGB4-209ENST00000583327 EPHB6O15197 1021 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 PHACTR2O75167 634 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 POLR2BP30876 1174 aaKnown RBP14.7□□□□□ -0.06
ITGB4-209ENST00000583327 CLCNKBP51801 687 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 LILRA4P59901 499 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 APBA1Q02410 837 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 SPECC1LQ69YQ0 1117 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 DCLRE1AQ6PJP8 1040 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 C3orf58Q8NDZ4 430 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 PDLIM2Q96JY6 352 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 RAD9AQ99638 391 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 PAAF1Q9BRP4 392 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 NUP58Q9BVL2 599 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 EDEM3Q9BZQ6 932 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 MTIF3Q9H2K0 278 aaKnown RBP14.7□□□□□ -0.06
ITGB4-209ENST00000583327 PRO3102Q9H379 93 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 GDAP2Q9NXN4 497 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 APEX2Q9UBZ4 518 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 DNAJB4Q9UDY4 337 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 INSL6Q9Y581 213 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 NUB1Q9Y5A7 615 aa14.7□□□□□ -0.06
ITGB4-209ENST00000583327 TNRC18O15417 2968 aaPredicted RBP14.69□□□□□ -0.06
ITGB4-209ENST00000583327 ZBBXA8MT70 800 aa14.69□□□□□ -0.06
ITGB4-209ENST00000583327 PODXLO00592 558 aa14.69□□□□□ -0.06
ITGB4-209ENST00000583327 SPTLC1O15269 473 aa14.69□□□□□ -0.06
ITGB4-209ENST00000583327 GALTP07902 379 aa14.69□□□□□ -0.06
ITGB4-209ENST00000583327 FAM163BP0C2L3 166 aa14.69□□□□□ -0.06
ITGB4-209ENST00000583327 IBSPP21815 317 aaPredicted RBP14.69□□□□□ -0.06
ITGB4-209ENST00000583327 PNPLA4P41247 253 aa14.69□□□□□ -0.06
ITGB4-209ENST00000583327 PIK3CAP42336 1068 aa14.69□□□□□ -0.06
ITGB4-209ENST00000583327 TRPC3Q13507 836 aa14.69□□□□□ -0.06
ITGB4-209ENST00000583327 LRRC43Q8N309 656 aa14.69□□□□□ -0.06
ITGB4-209ENST00000583327 HPDLQ96IR7 371 aa14.69□□□□□ -0.06
ITGB4-209ENST00000583327 PI4K2AQ9BTU6 479 aa14.69□□□□□ -0.06
ITGB4-209ENST00000583327 CACNG4Q9UBN1 327 aa14.69□□□□□ -0.06
ITGB4-209ENST00000583327 A0A1W2PQJ5 194 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 CASTOR2A6NHX0 329 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 RNF225M0QZC1 329 aaPredicted RBP14.68□□□□□ -0.06
ITGB4-209ENST00000583327 NRP1O14786 923 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 ALDH2P05091 517 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 KRT19P08727 400 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 UCHL3P15374 230 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 ATP2A2P16615 1042 aaKnown RBP14.68□□□□□ -0.06
ITGB4-209ENST00000583327 NOP14P78316 857 aaKnown RBP14.68□□□□□ -0.06
ITGB4-209ENST00000583327 GCNT1Q02742 428 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 ARID5BQ14865 1188 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 WDR44Q5JSH3 913 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 SPOPLQ6IQ16 392 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 ARHGEF19Q8IW93 802 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 UBR7Q8N806 425 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 CLP1Q92989 425 aaKnown RBP14.68□□□□□ -0.06
ITGB4-209ENST00000583327 JAKMIP2Q96AA8 810 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 IQCDQ96DY2 449 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 FAM81BQ96LP2 452 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 KREMEN1Q96MU8 473 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 NT5C1BQ96P26 610 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 LSM14BQ9BX40 385 aaKnown RBP14.68□□□□□ -0.06
ITGB4-209ENST00000583327 BCO2Q9BYV7 579 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 FAM124BQ9H5Z6 455 aaPredicted RBP14.68□□□□□ -0.06
ITGB4-209ENST00000583327 HCSTQ9UBK5 93 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 AJAP1Q9UKB5 411 aaPredicted RBP14.68□□□□□ -0.06
ITGB4-209ENST00000583327 CAPN11Q9UMQ6 739 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 CNTN6Q9UQ52 1028 aa14.68□□□□□ -0.06
ITGB4-209ENST00000583327 KPNA7A9QM74 516 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 GYPCP04921 128 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 RFX1P22670 979 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 SLC11A1P49279 550 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 TAF6P49848 677 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 BCAR1P56945 870 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 JAM2P57087 298 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 RNASELQ05823 741 aaKnown RBP14.67□□□□□ -0.06
ITGB4-209ENST00000583327 MYO1EQ12965 1108 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 IQCEQ6IPM2 695 aa14.67□□□□□ -0.06
ITGB4-209ENST00000583327 ENOSF1Q7L5Y1 443 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms