RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 DPYDQ12882 1025 aa13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 STK4Q13043 487 aa13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 PSMD2Q13200 908 aa13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 BMT2Q1RMZ1 405 aa13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 CES5AQ6NT32 575 aa13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 KANK3Q6NY19 840 aa13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 FMR1NBQ8N0W7 255 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 C12orf76Q8N812 135 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 S1PR5Q9H228 398 aa13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 SFXN1Q9H9B4 322 aa13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 MAN1C1Q9NR34 630 aa13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 AGPAT3Q9NRZ7 376 aa13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 HSPBP1Q9NZL4 362 aa13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 C2CD2Q9Y426 696 aa13.66□□□□□ -0.22
SMARCE1-218ENST00000582955 VWA8A3KMH1 1905 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 SYN3O14994 580 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 TGFB1I1O43294 461 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 TGM5O43548 720 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 SPATA31D3P0C874 917 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 SSTR3P32745 418 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 CYP2J2P51589 502 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 TFAMQ00059 246 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 FAM160A1Q05DH4 1040 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 ITIH3Q06033 890 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 CBX2Q14781 532 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 KNOP1Q1ED39 458 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 VARS2Q5ST30 1063 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 TMC5Q6UXY8 1006 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 DSTYKQ6XUX3 929 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 SPATA31D4Q6ZUB0 917 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 ANKS3Q6ZW76 656 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 EFCAB13Q8IY85 973 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 KIAA0895Q8NCT3 520 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 SUSD3Q96L08 255 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 CLSTN3Q9BQT9 956 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 DPP3Q9NY33 737 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 DPP7Q9UHL4 492 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 CDH22Q9UJ99 828 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 ANK1P16157 1881 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 PLXNA3P51805 1871 aa13.65□□□□□ -0.22
SMARCE1-218ENST00000582955 ZNF233A6NK53 670 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 TNFRSF10AO00220 468 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 PPEF2O14830 753 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 ADAM12O43184 909 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 WEE2P0C1S8 567 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 OR1D2P34982 312 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 WNT7BP56706 349 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 SNRPFP62306 86 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 C9orf57Q5W0N0 161 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 NT5DC4Q86YG4 428 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 CBWD2Q8IUF1 395 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 ADHFE1Q8IWW8 467 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 RDH13Q8NBN7 331 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 APPL2Q8NEU8 664 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 CACTINQ8WUQ7 758 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 SUSD6Q92537 303 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 RIPOR3Q96MK2 946 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 POP1Q99575 1024 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 KIAA1586Q9HCI6 787 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 PDE11AQ9HCR9 933 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 CGNQ9P2M7 1197 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 MTRRQ9UBK8 725 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 PRKAG3Q9UGI9 489 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 CDY1Q9Y6F8 540 aa13.64□□□□□ -0.23
SMARCE1-218ENST00000582955 H7C4K7 107 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 RHOBTB3O94955 611 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 KIF20AO95235 890 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 MTHFRP42898 656 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 ARPP19P56211 112 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 ZP2Q05996 745 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 PNOCQ13519 176 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 SNW1Q13573 536 aaKnown RBP13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 SURF1Q15526 300 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 USP37Q86T82 979 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 GJD3Q8N144 294 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 XXYLT1Q8NBI6 393 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 KREMEN2Q8NCW0 462 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 ENGASEQ8NFI3 743 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 GOLGA5Q8TBA6 731 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 PLEKHA4Q9H4M7 779 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 HOOK1Q9UJC3 728 aaKnown RBP13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 TIMM13Q9Y5L4 95 aaPredicted RBP13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 BACE2Q9Y5Z0 518 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 TTC28Q96AY4 2481 aa13.63□□□□□ -0.23
SMARCE1-218ENST00000582955 ANO9A1A5B4 782 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 M0QZQ0 153 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 PIRO00625 290 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 EXOC3O60645 756 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 GADD45BO75293 160 aaPredicted RBP13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 RFPL2O75678 378 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 C1RP00736 705 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 ITGB3P05106 788 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 TMEM191BP0C7N4 346 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 ODC1P11926 461 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 AARSP49588 968 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 TAF6P49848 677 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 LILRA4P59901 499 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 YWHAHQ04917 246 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms