RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PER3P56645 1201 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 TFF2Q03403 129 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 PTPRRQ15256 657 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 FCRLBQ6BAA4 426 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 C11orf87Q6NUJ2 197 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 FAM180AQ6UWF9 173 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 ZGPATQ8N5A5 531 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 PDPRQ8NCN5 879 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 OR2I1PQ8NGU4 316 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 LPIN2Q92539 896 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 ACE2Q9BYF1 805 aaPredicted RBP4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 GSTO2Q9H4Y5 243 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 IFT22Q9H7X7 185 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 CTTNBP2NLQ9P2B4 639 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 MAPRE3Q9UPY8 281 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 ADM5C9JUS6 153 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 ZEB2O60315 1214 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 PDE8AO60658 829 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 GPR32O75388 356 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 CDC45O75419 566 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 GATA3P23771 443 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 SLC6A4P31645 630 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 MALLQ13021 153 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 TXNRD1Q16881 649 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 DACT2Q5SW24 774 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 KAZNQ674X7 775 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 TMPRSS9Q7Z410 1059 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 RNF180Q86T96 592 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 DCBLD1Q8N8Z6 715 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 TGFBRAP1Q8WUH2 860 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 TFAP2BQ92481 460 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 ZNF804BA4D1E1 1349 aa4.86□□□□□ -1.63
SMCHD1-206ENST00000581631 PRAMEF33A0A0G2JMD5 474 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 TCRBV7S2A1N4TA0A589 114 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 LINC01548A6NM66 108 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 PRAMEF10O60809 474 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 LATS1O95835 1130 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 MTHFD2P13995 350 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 EZH2Q15910 746 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 TSTD2Q5T7W7 516 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 USP7Q93009 1102 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 CYFIP2Q96F07 1278 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 TLR10Q9BXR5 811 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 VTA1Q9NP79 307 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 INTS13Q9NVM9 706 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 APOBEC2Q9Y235 224 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 CACNA1IQ9P0X4 2223 aa4.85□□□□□ -1.63
SMCHD1-206ENST00000581631 KCNA2P16389 499 aa4.84□□□□□ -1.63
SMCHD1-206ENST00000581631 KRTAP10-6P60371 365 aaPredicted RBP4.84□□□□□ -1.63
SMCHD1-206ENST00000581631 EIF2B5Q13144 721 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-206ENST00000581631 TOR2AQ5JU69 321 aa4.84□□□□□ -1.63
SMCHD1-206ENST00000581631 TSHZ1Q6ZSZ6 1077 aa4.84□□□□□ -1.63
SMCHD1-206ENST00000581631 AMIGO2Q86SJ2 522 aa4.84□□□□□ -1.63
SMCHD1-206ENST00000581631 SLC30A5Q8TAD4 765 aa4.84□□□□□ -1.63
SMCHD1-206ENST00000581631 TBC1D15Q8TC07 691 aa4.84□□□□□ -1.63
SMCHD1-206ENST00000581631 TMEM125Q96AQ2 219 aa4.84□□□□□ -1.63
SMCHD1-206ENST00000581631 RUVBL1Q9Y265 456 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-206ENST00000581631 WNT6Q9Y6F9 365 aa4.84□□□□□ -1.63
SMCHD1-206ENST00000581631 LINC00473A8K010 186 aa4.83□□□□□ -1.64
SMCHD1-206ENST00000581631 VWC2LB2RUY7 222 aa4.83□□□□□ -1.64
SMCHD1-206ENST00000581631 ORC4O43929 436 aa4.83□□□□□ -1.64
SMCHD1-206ENST00000581631 MTNR1BP49286 362 aa4.83□□□□□ -1.64
SMCHD1-206ENST00000581631 SRSF2Q01130 221 aaKnown RBP4.83□□□□□ -1.64
SMCHD1-206ENST00000581631 JAZF1Q86VZ6 243 aa4.83□□□□□ -1.64
SMCHD1-206ENST00000581631 VGLL2Q8N8G2 317 aa4.83□□□□□ -1.64
SMCHD1-206ENST00000581631 SEMA6DQ8NFY4 1073 aa4.83□□□□□ -1.64
SMCHD1-206ENST00000581631 MYCBPAPQ8TBZ2 947 aa4.83□□□□□ -1.64
SMCHD1-206ENST00000581631 FBXL20Q96IG2 436 aa4.83□□□□□ -1.64
SMCHD1-206ENST00000581631 PGBD1Q96JS3 809 aa4.83□□□□□ -1.64
SMCHD1-206ENST00000581631 ADI1Q9BV57 179 aa4.83□□□□□ -1.64
SMCHD1-206ENST00000581631 SUN1O94901 812 aa4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 HAUS5O94927 633 aa4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 GPR3P46089 330 aa4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 HNRNPMP52272 730 aaKnown RBP eCLIP4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 RPS7P62081 194 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 LLGL1Q15334 1064 aa4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 SRSF7Q16629 238 aaKnown RBP eCLIP4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 ZNF782Q6ZMW2 699 aaPredicted RBP4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 STRA8Q7Z7C7 330 aa4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 CLNKQ7Z7G1 428 aa4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 ZNF48Q96MX3 618 aaPredicted RBP4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 TTC1Q99614 292 aa4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 USP35Q9P2H5 1018 aa4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 SERGEFQ9UGK8 458 aa4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 MRPL42Q9Y6G3 142 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-206ENST00000581631 FNDC1Q4ZHG4 1894 aaPredicted RBP4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 GOLGA8AA7E2F4 631 aa4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 FAM171A2A8MVW0 826 aa4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 IKBKBO14920 756 aa4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 MYCLP1P12525 358 aaPredicted RBP4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 GSPT1P15170 499 aaKnown RBP4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 DDCP20711 480 aa4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 EXOSC10Q01780 885 aaKnown RBP4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 SLC10A2Q12908 348 aaPredicted RBP4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 DYRK1AQ13627 763 aa4.81□□□□□ -1.64
SMCHD1-206ENST00000581631 ZNF626Q68DY1 528 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms