RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 RAB39AQ14964 217 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 FAM214AQ32MH5 1076 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 ANO6Q4KMQ2 910 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 MFSD14BQ5SR56 506 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 HEATR3Q7Z4Q2 680 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 APBB1IPQ7Z5R6 666 aaPredicted RBP5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 SRGAP1Q7Z6B7 1085 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 FAM83AQ86UY5 434 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 TTC17Q96AE7 1141 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 IL17RAQ96F46 866 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 CDK5RAP3Q96JB5 506 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 ENKD1Q9H0I2 346 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 CYP4F11Q9HBI6 524 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 GPRC5BQ9NZH0 403 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 FAM227AF5H4B4 570 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 APAF1O14727 1248 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 FOXN1O15353 648 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 HOXA3O43365 443 aaPredicted RBP5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 STC2O76061 302 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 ZBED1O96006 694 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 RAP2AP10114 183 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 ALOX15P16050 662 aaPredicted RBP5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 MALP21145 153 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 ALDH1A3P47895 512 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 AGFG1P52594 562 aaKnown RBP5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 RABGGTBP53611 331 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 TLE1Q04724 770 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 MRPL49Q13405 166 aaKnown RBP5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 SNAPC2Q13487 334 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 KIAA0753Q2KHM9 967 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 AFMIDQ63HM1 303 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 ZNF572Q7Z3I7 529 aaPredicted RBP5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 COL23A1Q86Y22 540 aaPredicted RBP5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 PJA1Q8NG27 643 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 PLBD2Q8NHP8 589 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 DDX21Q9NR30 783 aaKnown RBP eCLIP5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 CHST12Q9NRB3 414 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 LMBRD1Q9NUN5 540 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 CALCOCO1Q9P1Z2 691 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 ABCF2Q9UG63 623 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 L1RE1Q9UN81 338 aa5.91□□□□□ -1.46
SMCHD1-205ENST00000581383 A0A088AWK7 358 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 KLRG2A4D1S0 409 aaPredicted RBP5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 NUDT3O95989 172 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 GCP02774 474 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 IL12RB1P42701 662 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 PLS1Q14651 629 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 SAFBQ15424 915 aaKnown RBP eCLIP5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 DCAF17Q5H9S7 520 aaPredicted RBP5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 FAM47AQ5JRC9 791 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 SYCP2LQ5T4T6 812 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 DPY19L2P1Q6NXN4 242 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 KIAA0319LQ8IZA0 1049 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 CASKIN2Q8WXE0 1202 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 NT5C1BQ96P26 610 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 AGAP2Q99490 1192 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 MYOCQ99972 504 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 SPON1Q9HCB6 807 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 MOCS1Q9NZB8 636 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 STAP2Q9UGK3 403 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 ZNHIT2Q9UHR6 403 aa5.9□□□□□ -1.46
SMCHD1-205ENST00000581383 ATRNL1Q5VV63 1379 aa5.9□□□□□ -1.47
SMCHD1-205ENST00000581383 CFAP69A5D8W1 941 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 CAPN8A6NHC0 703 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 PRR5-ARHGAP8B1AHC4 643 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 PEX14O75381 377 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 ARIH2O95376 493 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 HRGP04196 525 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 ITGB1P05556 798 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 NBPF7P0C2Y1 421 aaPredicted RBP5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 LAG3P18627 525 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 CTXN1P60606 82 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 RAB1AP62820 205 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 NKX6-1P78426 367 aaPredicted RBP5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 CREMQ03060 361 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 SP140Q13342 867 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 CNN3Q15417 329 aaKnown RBP5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 FLYWCH1Q4VC44 716 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 RNF220Q5VTB9 566 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 IL31Q6EBC2 164 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 DARS2Q6PI48 645 aaKnown RBP5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 MRGPREQ86SM8 312 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 XYLT1Q86Y38 959 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 FAM43AQ8N2R8 423 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 DCBLD1Q8N8Z6 715 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 SLC35B2Q8TB61 432 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 SLC35A4Q96G79 324 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 MRI1Q9BV20 369 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 KCNH6Q9H252 994 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 BHMT2Q9H2M3 363 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 RIOX1Q9H6W3 641 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 SLC23A1Q9UHI7 598 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 FZD1Q9UP38 647 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 PCDHGB6Q9Y5F9 930 aa5.89□□□□□ -1.47
SMCHD1-205ENST00000581383 TCRBV7S2A1N4TA0A589 114 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 TEX33O43247 280 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 TYRP14679 529 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 FLT3LGP49771 235 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 NEK3P51956 506 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 HDAC1Q13547 482 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms