RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 CCDC127Q96BQ5 260 aa9.05□□□□□ -0.96
RIOK3-204ENST00000581220 TTC25Q96NG3 672 aa9.05□□□□□ -0.96
RIOK3-204ENST00000581220 KIAA1683Q9H0B3 1180 aa9.05□□□□□ -0.96
RIOK3-204ENST00000581220 TRABDQ9H4I3 376 aa9.05□□□□□ -0.96
RIOK3-204ENST00000581220 KCNQ5Q9NR82 932 aa9.05□□□□□ -0.96
RIOK3-204ENST00000581220 SENP1Q9P0U3 644 aa9.05□□□□□ -0.96
RIOK3-204ENST00000581220 LRRD1A4D1F6 860 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 POC1B-GALNT4F8VUJ3 575 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 IPO5O00410 1097 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 PEX11AO75192 247 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 RALAP11233 206 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 ABL2P42684 1182 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 SLC18A1P54219 525 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 MRPS35P82673 323 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 PDK4Q16654 411 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 RBM26Q5T8P6 1007 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 HHATQ5VTY9 493 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 ZNF449Q6P9G9 518 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 CCDC174Q6PII3 467 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 RGS9BPQ6ZS82 235 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 USP37Q86T82 979 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 ZCCHC9Q8N567 271 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 FAM13CQ8NE31 585 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 SEMA4DQ92854 862 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 TBC1D10AQ9BXI6 508 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 YIPF3Q9GZM5 350 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 TMEM8AQ9HCN3 771 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 SAYSD1Q9NPB0 183 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 AVENQ9NQS1 362 aaPredicted RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 EURLQ9NYK6 297 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 EXOC7Q9UPT5 735 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 R3HDM2Q9Y2K5 976 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 BTAF1O14981 1849 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 EDF1O60869 148 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 P4HBP07237 508 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 VIL1P09327 827 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 TPBGLP0DKB5 382 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 ATP6V1C1P21283 382 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 CA4P22748 312 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 CTCFP49711 727 aaPredicted RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 GPC3P51654 580 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 SARNPP82979 210 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 GTF2BQ00403 316 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 PTP4A2Q12974 167 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 MOGSQ13724 837 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 SNRNP35Q16560 246 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 P3H1Q32P28 736 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 TMEM63BQ5T3F8 832 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 FYB2Q5VWT5 728 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 TDRPQ86YL5 185 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 RHOT1Q8IXI2 618 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 MCOLN2Q8IZK6 566 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 FBXL13Q8NEE6 735 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 ZSWIM2Q8NEG5 633 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 HELQQ8TDG4 1101 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 SH3TC2Q8TF17 1288 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 DDX1Q92499 740 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 DDX27Q96GQ7 796 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 ZDHHC15Q96MV8 337 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 RIT2Q99578 217 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 SH3GL3Q99963 347 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 RAB20Q9NX57 234 aa9.04□□□□□ -0.96
RIOK3-204ENST00000581220 RPL26L1Q9UNX3 145 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 MRPL11Q9Y3B7 192 aaKnown RBP9.04□□□□□ -0.96
RIOK3-204ENST00000581220 SMCHD1A6NHR9 2005 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 MROH7Q68CQ1 1323 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 ENO4A6NNW6 628 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 ABLIM1O14639 778 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 PSTPIP1O43586 416 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 HNRNPCL1O60812 293 aaKnown RBP9.03□□□□□ -0.96
RIOK3-204ENST00000581220 GH2P01242 217 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 ADRB2P07550 413 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 ATP4AP20648 1035 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 PTPN4P29074 926 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 HOXD11P31277 338 aaPredicted RBP9.03□□□□□ -0.96
RIOK3-204ENST00000581220 SSR1P43307 286 aaKnown RBP9.03□□□□□ -0.96
RIOK3-204ENST00000581220 NSFP46459 744 aaKnown RBP9.03□□□□□ -0.96
RIOK3-204ENST00000581220 SEPT7Q16181 437 aaKnown RBP9.03□□□□□ -0.96
RIOK3-204ENST00000581220 SPDYAQ5MJ70 313 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 LIN9Q5TKA1 542 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 PHLDB2Q86SQ0 1253 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 PRUNE1Q86TP1 453 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 CBWD2Q8IUF1 395 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 APLFQ8IW19 511 aaPredicted RBP9.03□□□□□ -0.96
RIOK3-204ENST00000581220 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.03□□□□□ -0.96
RIOK3-204ENST00000581220 LARGE2Q8N3Y3 721 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 ENDOVQ8N8Q3 282 aaKnown RBP9.03□□□□□ -0.96
RIOK3-204ENST00000581220 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.03□□□□□ -0.96
RIOK3-204ENST00000581220 DENND1AQ8TEH3 1009 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 FAM118BQ9BPY3 351 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 HERPUD2Q9BSE4 406 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 OSBPL8Q9BZF1 889 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 VPS37BQ9H9H4 285 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 KIAA1586Q9HCI6 787 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 SLCO1B3Q9NPD5 702 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 ZFP69BQ9UJL9 534 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 COQ4Q9Y3A0 265 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 NEU2Q9Y3R4 380 aa9.03□□□□□ -0.96
RIOK3-204ENST00000581220 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.03□□□□□ -0.96
RIOK3-204ENST00000581220 ADAMTSL1Q8N6G6 1762 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms