RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 ERCC4Q92889 916 aaPredicted RBP10.73□□□□□ -0.69
GGA3-209ENST00000580646 SYAP1Q96A49 352 aaPredicted RBP10.73□□□□□ -0.69
GGA3-209ENST00000580646 KLHL5Q96PQ7 755 aa10.73□□□□□ -0.69
GGA3-209ENST00000580646 PPP1R10Q96QC0 940 aaKnown RBP10.73□□□□□ -0.69
GGA3-209ENST00000580646 CBWD1Q9BRT8 395 aa10.73□□□□□ -0.69
GGA3-209ENST00000580646 HERC2P3Q9BVR0 1158 aa10.73□□□□□ -0.69
GGA3-209ENST00000580646 EMILIN2Q9BXX0 1053 aa10.73□□□□□ -0.69
GGA3-209ENST00000580646 IKZF4Q9H2S9 585 aa10.73□□□□□ -0.69
GGA3-209ENST00000580646 MRPL17Q9NRX2 175 aaKnown RBP10.73□□□□□ -0.69
GGA3-209ENST00000580646 HSPBP1Q9NZL4 362 aa10.73□□□□□ -0.69
GGA3-209ENST00000580646 C2CD2Q9Y426 696 aa10.73□□□□□ -0.69
GGA3-209ENST00000580646 SMIM28A0A1B0GU29 152 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 ZNF233A6NK53 670 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 LOC730098B7Z3J9 87 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 F8W810 466 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 C2CD2LO14523 706 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 MEFVO15553 781 aaPredicted RBP10.72□□□□□ -0.69
GGA3-209ENST00000580646 XPOTO43592 962 aaKnown RBP10.72□□□□□ -0.69
GGA3-209ENST00000580646 EFEMP2O95967 443 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 URODP06132 367 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 CNPP09543 421 aaKnown RBP10.72□□□□□ -0.69
GGA3-209ENST00000580646 CXCL8P10145 99 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 HARSP12081 509 aaKnown RBP10.72□□□□□ -0.69
GGA3-209ENST00000580646 EPCAMP16422 314 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 CYP3A5P20815 502 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 CCNE1P24864 410 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 RPL13P26373 211 aaKnown RBP10.72□□□□□ -0.69
GGA3-209ENST00000580646 KLRC2P26717 231 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 TNFSF9P41273 254 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 MCCD1P59942 119 aaPredicted RBP10.72□□□□□ -0.69
GGA3-209ENST00000580646 OSTNP61366 133 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 ITIH3Q06033 890 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 CBX2Q14781 532 aaPredicted RBP10.72□□□□□ -0.69
GGA3-209ENST00000580646 ZBTB6Q15916 424 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 SKOR2Q2VWA4 1001 aaPredicted RBP10.72□□□□□ -0.69
GGA3-209ENST00000580646 CES5AQ6NT32 575 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 RNF135Q8IUD6 432 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 ZC3H3Q8IXZ2 948 aaKnown RBP10.72□□□□□ -0.69
GGA3-209ENST00000580646 RNF168Q8IYW5 571 aaPredicted RBP10.72□□□□□ -0.69
GGA3-209ENST00000580646 MLKLQ8NB16 471 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 RPGRIP1Q96KN7 1286 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 UROC1Q96N76 676 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 ADAM7Q9H2U9 754 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 DZANK1Q9NVP4 752 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 SSX2IPQ9Y2D8 614 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 SCN1AP35498 2009 aa10.72□□□□□ -0.69
GGA3-209ENST00000580646 BICDL2A1A5D9 508 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 VWA8A3KMH1 1905 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 FAM86C2PA6NEL3 165 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 LACTBL1A8MY62 500 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 PPP1R3GB7ZBB8 358 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 TMEM189-UBE2V1I3L0A0 370 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 CLIC2O15247 247 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 TADA2AO75478 443 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 NR3C1P04150 777 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 RPL9P32969 192 aaKnown RBP10.71□□□□□ -0.69
GGA3-209ENST00000580646 GLUD2P49448 558 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 ACOT2P49753 483 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 NLRP12P59046 1061 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 DSG1Q02413 1049 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 SNRNP35Q16560 246 aaKnown RBP10.71□□□□□ -0.69
GGA3-209ENST00000580646 SEZ6Q53EL9 994 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 ZBTB41Q5SVQ8 909 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 RARS2Q5T160 578 aaKnown RBP10.71□□□□□ -0.69
GGA3-209ENST00000580646 KIAA0319Q5VV43 1072 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 KIAA1841Q6NSI8 718 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 FUT10Q6P4F1 479 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 SMYD4Q8IYR2 804 aaPredicted RBP10.71□□□□□ -0.69
GGA3-209ENST00000580646 C12orf76Q8N812 135 aaPredicted RBP10.71□□□□□ -0.69
GGA3-209ENST00000580646 RABGGTAQ92696 567 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 SAAL1Q96ER3 474 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 DDX27Q96GQ7 796 aaKnown RBP10.71□□□□□ -0.69
GGA3-209ENST00000580646 ZMAT2Q96NC0 199 aaKnown RBP10.71□□□□□ -0.69
GGA3-209ENST00000580646 TSG101Q99816 390 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 FAM213AQ9BRX8 229 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 MKNK1Q9BUB5 465 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 GPR62Q9BZJ7 368 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 CXCL16Q9H2A7 254 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 PCIF1Q9H4Z3 704 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 RXFP1Q9HBX9 757 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 CHST7Q9NS84 486 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 RBAKQ9NYW8 714 aaPredicted RBP10.71□□□□□ -0.69
GGA3-209ENST00000580646 DACH1Q9UI36 760 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 MUTYHQ9UIF7 546 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 CDH22Q9UJ99 828 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 ADAM28Q9UKQ2 775 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 UBQLN1Q9UMX0 589 aaKnown RBP10.71□□□□□ -0.69
GGA3-209ENST00000580646 MAPK8IP1Q9UQF2 711 aa10.71□□□□□ -0.69
GGA3-209ENST00000580646 ARIH1Q9Y4X5 557 aaPredicted RBP10.71□□□□□ -0.69
GGA3-209ENST00000580646 CASTOR2A6NHX0 329 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 TEX28O15482 410 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 EXOC3O60645 756 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 LETM1O95202 739 aaPredicted RBP10.7□□□□□ -0.7
GGA3-209ENST00000580646 CD44P16070 742 aaKnown RBP10.7□□□□□ -0.7
GGA3-209ENST00000580646 PAX3P23760 479 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 NR2F2P24468 414 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 LRPAP1P30533 357 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 CLCN4P51793 760 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 FKBP3Q00688 224 aaKnown RBP10.7□□□□□ -0.7
GGA3-209ENST00000580646 PAK1Q13153 545 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms