RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 APPL2Q8NEU8 664 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 LNX1Q8TBB1 728 aaPredicted RBP11.82□□□□□ -0.52
NDEL1-208ENST00000580237 SMG7Q92540 1137 aaKnown RBP11.82□□□□□ -0.52
NDEL1-208ENST00000580237 CCDC47Q96A33 483 aaKnown RBP11.82□□□□□ -0.52
NDEL1-208ENST00000580237 CCDC34Q96HJ3 373 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 CBWD1Q9BRT8 395 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 STRA6Q9BX79 667 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 C1QTNF1Q9BXJ1 281 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 ASB7Q9H672 318 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 GDPD2Q9HCC8 539 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 RBAKQ9NYW8 714 aaPredicted RBP11.82□□□□□ -0.52
NDEL1-208ENST00000580237 MTRRQ9UBK8 725 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 FBXW11Q9UKB1 542 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 DERAQ9Y315 318 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 STYXL1Q9Y6J8 313 aa11.82□□□□□ -0.52
NDEL1-208ENST00000580237 CCDC195A0A1B0GUA6 201 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 GOLGA8IPA6NC78 632 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 C19orf67A6NJJ6 358 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 GOLGA8JA6NMD2 632 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 KIAA0391O15091 583 aaKnown RBP11.81□□□□□ -0.52
NDEL1-208ENST00000580237 ACTN4O43707 911 aaKnown RBP11.81□□□□□ -0.52
NDEL1-208ENST00000580237 RFPL2O75678 378 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 C8AP07357 584 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 CPB1P15086 417 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 IGFBP6P24592 240 aaPredicted RBP11.81□□□□□ -0.52
NDEL1-208ENST00000580237 ADSSP30520 456 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 LRPAP1P30533 357 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 TFAMQ00059 246 aaKnown RBP11.81□□□□□ -0.52
NDEL1-208ENST00000580237 CUL4BQ13620 913 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 CTXN3Q4LDR2 81 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 PPM1LQ5SGD2 360 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 SPATA1Q5VX52 437 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 CNNM4Q6P4Q7 775 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 GPR149Q86SP6 731 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 USP37Q86T82 979 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 RNF135Q8IUD6 432 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 BRSK2Q8IWQ3 736 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 NELFCDQ8IXH7 590 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 GPD1LQ8N335 351 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 GLIS3Q8NEA6 775 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 HDAC7Q8WUI4 952 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 SUSD3Q96L08 255 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 CLSTN3Q9BQT9 956 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 PCIF1Q9H4Z3 704 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 ZDHHC7Q9NXF8 308 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 MUTYHQ9UIF7 546 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 PCDHB8Q9UN66 801 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 POLIQ9UNA4 740 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 R3HCC1Q9Y3T6 440 aaKnown RBP11.81□□□□□ -0.52
NDEL1-208ENST00000580237 C2CD2Q9Y426 696 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 BACE2Q9Y5Z0 518 aa11.81□□□□□ -0.52
NDEL1-208ENST00000580237 PVALEFA0A1B0GWK0 134 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 A0A1W2PQ27 194 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 A0A1W2PQ64 194 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 A0A1W2PQD8 194 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 ARHGEF37A1IGU5 675 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 LOC730098B7Z3J9 87 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 PRRG1O14668 218 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 EXTL3O43909 919 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 XYLBO75191 536 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 ZMYND10O75800 440 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 C1RP00736 705 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 TMEM191BP0C7N4 346 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 ODC1P11926 461 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 ELF1P32519 619 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 NDUFA8P51970 172 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 YWHAHQ04917 246 aaPredicted RBP11.8□□□□□ -0.52
NDEL1-208ENST00000580237 CD300LGQ6UXG3 332 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 NT5DC4Q86YG4 428 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 TMEM130Q8N3G9 435 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 CMASQ8NFW8 434 aaPredicted RBP11.8□□□□□ -0.52
NDEL1-208ENST00000580237 SLC7A14Q8TBB6 771 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 ACSF2Q96CM8 615 aaPredicted RBP11.8□□□□□ -0.52
NDEL1-208ENST00000580237 PAGE5Q96GU1 130 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 ZNF560Q96MR9 790 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 EPHX3Q9H6B9 360 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 SLC39A2Q9NP94 309 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 DPP3Q9NY33 737 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 CLUHO75153 1309 aa11.8□□□□□ -0.52
NDEL1-208ENST00000580237 C5orf42Q9H799 3197 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 FAM86C2PA6NEL3 165 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 C2CD4DB7Z1M9 353 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 PPEF2O14830 753 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 ADAM12O43184 909 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 CLSTN1O94985 981 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 MYL1P05976 194 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 ADRB2P07550 413 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 GBP2P32456 591 aaPredicted RBP11.79□□□□□ -0.52
NDEL1-208ENST00000580237 ANP32AP39687 249 aaKnown RBP11.79□□□□□ -0.52
NDEL1-208ENST00000580237 CYP2J2P51589 502 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 POU5F1Q01860 360 aaKnown RBP11.79□□□□□ -0.52
NDEL1-208ENST00000580237 ROR1Q01973 937 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 RAB33AQ14088 237 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 ZBTB6Q15916 424 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 SV2CQ496J9 727 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 C9orf57Q5W0N0 161 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 CRELD2Q6UXH1 353 aaPredicted RBP11.79□□□□□ -0.52
NDEL1-208ENST00000580237 CYP26C1Q6V0L0 522 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 GET4Q7L5D6 327 aaPredicted RBP11.79□□□□□ -0.52
NDEL1-208ENST00000580237 OTOP3Q7RTS5 596 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms