RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 ZNF526Q8TF50 670 aaPredicted RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 PRPF31Q8WWY3 499 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 ZNF516Q92618 1163 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 GLG1Q92896 1179 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 TMEM143Q96AN5 459 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 ZNF653Q96CK0 615 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 MS4A14Q96JA4 679 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 PCDHB18PQ96TA0 734 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 PAGR1Q9BTK6 254 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 ASB7Q9H672 318 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 VRTNQ9H8Y1 702 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 EPB41L5Q9HCM4 733 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 PTPRHQ9HD43 1115 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 OSGEPQ9NPF4 335 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 SLC5A4Q9NY91 659 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 CPSF3Q9UKF6 684 aaKnown RBP9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 COG5Q9UP83 839 aa9.47□□□□□ -0.89
PPP4R1-213ENST00000579609 ZBTB42B2RXF5 422 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 H3BQF6 201 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 FSCN2O14926 492 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 THAP12O43422 761 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 RNF40O75150 1001 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 PPFIA4O75335 1185 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 VNN1O95497 513 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 SYF2O95926 243 aaKnown RBP9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 FGGP02679 453 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 CALB1P05937 261 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 MMEP08473 750 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 TXNP10599 105 aaKnown RBP9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 TMOD1P28289 359 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 USP8P40818 1118 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 CETN2P41208 172 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 EIF3BP55884 814 aaKnown RBP9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 BIRC3Q13489 604 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 NCOA4Q13772 614 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 PRKG1Q13976 671 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 LRRC38Q5VT99 294 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 PLEKHA7Q6IQ23 1121 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 CEP128Q6ZU80 1094 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 PALB2Q86YC2 1186 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 ZSWIM2Q8NEG5 633 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 SLC10A4Q96EP9 437 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 SPATA33Q96N06 139 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 PSMB7Q99436 277 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 SH2D3AQ9BRG2 576 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 NUP85Q9BW27 656 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 TARS2Q9BW92 718 aaKnown RBP9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 NIF3L1Q9GZT8 377 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 LRRC19Q9H756 370 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 TAS2R14Q9NYV8 317 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 CNOT8Q9UFF9 292 aaKnown RBP9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 STRIP2Q9ULQ0 834 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 PCDHGC3Q9UN70 934 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 FZD1Q9UP38 647 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 LHX6Q9UPM6 363 aa9.46□□□□□ -0.9
PPP4R1-213ENST00000579609 MCM3APO60318 1980 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 HMGB1P1B2RPK0 211 aaPredicted RBP9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 AGPSO00116 658 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 ZEB2O60315 1214 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 SHOX2O60902 331 aaPredicted RBP9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 PHACTR2O75167 634 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 C22orf31O95567 290 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 TNNC2P02585 160 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 IVLP07476 585 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 PAEPP09466 180 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 EIF4BP23588 611 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 MAPK4P31152 587 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 MATR3P43243 847 aaKnown RBP eCLIP9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 SOX10P56693 466 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 NOMO3P69849 1222 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 SKOR1P84550 965 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 SP4Q02446 784 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 CAV1Q03135 178 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 LY6KQ17RY6 165 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 ATF7IP2Q5U623 682 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 MAMSTRQ6ZN01 415 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 RUFY4Q6ZNE9 571 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 MON1BQ7L1V2 547 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 ZNF410Q86VK4 478 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 ARFGAP2Q8N6H7 521 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 GRK7Q8WTQ7 553 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 HDAC7Q8WUI4 952 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 NLRP7Q8WX94 980 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 CASKIN2Q8WXE0 1202 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 KAT5Q92993 513 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 TATDN2Q93075 761 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 ANKRD36BP1Q96IX9 119 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 CLMNQ96JQ2 1002 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 ARID3AQ99856 593 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 ERP44Q9BS26 406 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 FOXP3Q9BZS1 431 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 CYP3A43Q9HB55 503 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 TXNRD2Q9NNW7 524 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 TOPORSQ9NS56 1045 aaPredicted RBP9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 EHD2Q9NZN4 543 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 PACSIN2Q9UNF0 486 aaPredicted RBP9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 DERAQ9Y315 318 aa9.45□□□□□ -0.9
PPP4R1-213ENST00000579609 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms