RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 MAMSTRQ6ZN01 415 aa11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 TPRG1Q6ZUI0 275 aa11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 ZBTB44Q8NCP5 570 aa11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 TMEM161BQ8NDZ6 487 aa11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 ZSWIM3Q96MP5 696 aa11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 CORO1BQ9BR76 489 aa11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 TCHPQ9BT92 498 aa11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 TIPINQ9BVW5 301 aa11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 CYP4F11Q9HBI6 524 aa11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 SH2B1Q9NRF2 756 aaPredicted RBP11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 HEBP1Q9NRV9 189 aa11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 PCDHGA2Q9Y5H1 932 aa11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 INSL5Q9Y5Q6 135 aa11.65□□□□□ -0.54
CSNK1D-210ENST00000579308 COL4A3Q01955 1670 aa11.65□□□□□ -0.55
CSNK1D-210ENST00000579308 CEP250Q9BV73 2442 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 ZNF197O14709 1029 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 KINO60870 393 aaKnown RBP11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 LILRB5O75023 590 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 OAZ2O95190 189 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 VNN2O95498 520 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 LRG1P02750 347 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 NEFLP07196 543 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 MAPTP10636 758 aaKnown RBP11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 PLS3P13797 630 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 EPHA5P54756 1037 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 ARPP19P56211 112 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 MCL1Q07820 350 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 ADCY1Q08828 1119 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 GNL2Q13823 731 aaKnown RBP11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 ZBTB6Q15916 424 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 CTXN3Q4LDR2 81 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 ERICH6BQ5W0A0 696 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 DTHD1Q6ZMT9 781 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 MAP4K3Q8IVH8 894 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 HS6ST3Q8IZP7 471 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 KCTD17Q8N5Z5 321 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 FAM184AQ8NB25 1140 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 BEST2Q8NFU1 509 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 DDX12PQ92771 950 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 DNASE1L2Q92874 299 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 KCNN1Q92952 543 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 TBC1D32Q96NH3 1257 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 ASB16Q96NS5 453 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 PNMA5Q96PV4 448 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 HAPLN2Q9GZV7 340 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 TRPV4Q9HBA0 871 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 ZFP14Q9HCL3 533 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 TRPV5Q9NQA5 729 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 PRMT8Q9NR22 394 aaPredicted RBP11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 ZSCAN32Q9NX65 697 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 DLL3Q9NYJ7 618 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 CEP72Q9P209 647 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 AFF4Q9UHB7 1163 aaKnown RBP11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 KCNG1Q9UIX4 513 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 PCDHB8Q9UN66 801 aa11.64□□□□□ -0.55
CSNK1D-210ENST00000579308 TTC26A0AVF1 554 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 M0QZQ0 153 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 SPTLC1O15269 473 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 NCAM2O15394 837 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 TDGF1P13385 188 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 LRPAP1P30533 357 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 SLC12A3P55017 1021 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 PUM1Q14671 1186 aaKnown RBP eCLIP11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 NOLC1Q14978 699 aaKnown RBP eCLIP11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 SEZ6Q53EL9 994 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 ARSHQ5FYA8 562 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 CYP4A22Q5TCH4 519 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 ZPBP2Q6X784 338 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 RNF19BQ6ZMZ0 732 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 TMEM130Q8N3G9 435 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 SYT2Q8N9I0 419 aaPredicted RBP11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 APPL2Q8NEU8 664 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 ATRIPQ8WXE1 791 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 SMARCD2Q92925 531 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 TRMT61BQ9BVS5 477 aaKnown RBP11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 LRRC3Q9BY71 257 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 EPC1Q9H2F5 836 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 PLEKHA5Q9HAU0 1116 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 TUBGCP4Q9UGJ1 667 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 MRPS17Q9Y2R5 130 aaKnown RBP11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 NUB1Q9Y5A7 615 aa11.63□□□□□ -0.55
CSNK1D-210ENST00000579308 NCOR2Q9Y618 2525 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 F5P12259 2224 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 MED19A0JLT2 244 aaPredicted RBP11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 ARNTLO00327 626 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 MAN2B1O00754 1011 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 CLDN3O15551 220 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 ADRB2P07550 413 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 CLTAP09496 248 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 AARSP49588 968 aaKnown RBP eCLIP11.62□□□□□ -0.555e-7■■■■■ 34.9
CSNK1D-210ENST00000579308 SMTNP53814 917 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 ATP2C1P98194 919 aaPredicted RBP11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 TWF1Q12792 350 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 STRN3Q13033 797 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 MTAPQ13126 283 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 GRM2Q14416 872 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 ZNF280DQ6N043 979 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 VITQ6UXI7 678 aa11.62□□□□□ -0.55
CSNK1D-210ENST00000579308 PDZD4Q76G19 769 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms