RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 VIPR2P41587 438 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 CCR3P51677 355 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 TWF1Q12792 350 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 PRSS36Q5K4E3 855 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 TPGS2Q68CL5 300 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 POTEHQ6S545 545 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 HS6ST3Q8IZP7 471 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 CELF5Q8N6W0 485 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 CSGALNACT1Q8TDX6 532 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 NELL1Q92832 810 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 SMARCD2Q92925 531 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 ASB16Q96NS5 453 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 ACO2Q99798 780 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 MRPL4Q9BYD3 311 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 CDT1Q9H211 546 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 CHRDQ9H2X0 955 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 ZNF334Q9HCZ1 680 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 ASAH2Q9NR71 780 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 LRWD1Q9UFC0 647 aa13.8□□□□□ -0.2
CDK5RAP3-212ENST00000579175 K7ELQ4 463 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 KRT37O76014 449 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 MICAL2O94851 1124 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 MUTP22033 750 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 FCARP24071 287 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 CCNE1P24864 410 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 RPL9P32969 192 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 CCR2P41597 374 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 CXCL12P48061 93 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 NEK4P51957 841 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 KPNA1P52294 538 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 DMP1Q13316 513 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 LAIR1Q6GTX8 287 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 ZNF280DQ6N043 979 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 VITQ6UXI7 678 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 APPL2Q8NEU8 664 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 ZSCAN18Q8TBC5 510 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 C18orf25Q96B23 403 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 C8orf76Q96K31 380 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 ZSWIM3Q96MP5 696 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 TARS2Q9BW92 718 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 PARD6AQ9NPB6 346 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 KMT5AQ9NQR1 393 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 DDX19AQ9NUU7 478 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 SPTBN2O15020 2390 aa13.79□□□□□ -0.2
CDK5RAP3-212ENST00000579175 MCF2P10911 925 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 MATR3P43243 847 aaKnown RBP eCLIP13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 NPTX2P47972 431 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 MCM2P49736 904 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 SIM2Q14190 667 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 ECM1Q16610 540 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 TTC38Q5R3I4 469 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 ALKAL1Q6UXT8 129 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 RNF19BQ6ZMZ0 732 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 GPIHBP1Q8IV16 184 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 MAP4K3Q8IVH8 894 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 FAM200AQ8TCP9 573 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 SNX29Q8TEQ0 813 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 DEPDC1BQ8WUY9 529 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 CHAMP1Q96JM3 812 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 ZMAT2Q96NC0 199 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 IER2Q9BTL4 223 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 CEP72Q9P209 647 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 AFF4Q9UHB7 1163 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 DNM3Q9UQ16 869 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 PHLPP2Q6ZVD8 1323 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 FRYLO94915 3013 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 CACNA1BQ00975 2339 aa13.78□□□□□ -0.2
CDK5RAP3-212ENST00000579175 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 SHISA7A6NL88 538 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 HEPACAM2A8MVW5 462 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 NRG2O14511 850 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 DPYSL4O14531 572 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 HIP1RO75146 1068 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 RETP07949 1114 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 KCNE1P15382 129 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 STRN3Q13033 797 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 ORC2Q13416 577 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 MRPL58Q14197 206 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 TEAD2Q15562 447 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 XKR4Q5GH76 650 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 HEATR6Q6AI08 1181 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 MPZL3Q6UWV2 235 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 MFSD6LQ8IWD5 586 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 LEMD2Q8NC56 503 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 TTC8Q8TAM2 541 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 DDX12PQ92771 950 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 SUSD3Q96L08 255 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 DRC1Q96MC2 740 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 RAB34Q9BZG1 259 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 GPR88Q9GZN0 384 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 TMEM134Q9H6X4 195 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 ANKFY1Q9P2R3 1169 aa13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 NOL7Q9UMY1 257 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-212ENST00000579175 TPRP12270 2363 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-212ENST00000579175 F5P12259 2224 aa13.76□□□□□ -0.21
CDK5RAP3-212ENST00000579175 SFI1A8K8P3 1242 aa13.76□□□□□ -0.21
CDK5RAP3-212ENST00000579175 CHURC1-FNTBB4DL54 471 aa13.76□□□□□ -0.21
CDK5RAP3-212ENST00000579175 E9PMD0 336 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms