RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 C3orf58Q8NDZ4 430 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 GOLGA5Q8TBA6 731 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 HDAC7Q8WUI4 952 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 SMG7Q92540 1137 aaKnown RBP7.1□□□□□ -1.27
TRAF4-213ENST00000578917 KCNN1Q92952 543 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 ACSF2Q96CM8 615 aaPredicted RBP7.1□□□□□ -1.27
TRAF4-213ENST00000578917 CLSTN3Q9BQT9 956 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 CBWD1Q9BRT8 395 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 STRA6Q9BX79 667 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 S1PR5Q9H228 398 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 DERAQ9Y315 318 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 TIMM13Q9Y5L4 95 aaPredicted RBP7.1□□□□□ -1.27
TRAF4-213ENST00000578917 CDY1Q9Y6F8 540 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 STYXL1Q9Y6J8 313 aa7.1□□□□□ -1.27
TRAF4-213ENST00000578917 WDR81Q562E7 1941 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 ACTN4O43707 911 aaKnown RBP7.09□□□□□ -1.27
TRAF4-213ENST00000578917 EXOC3O60645 756 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 PHACTR2O75167 634 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 XYLBO75191 536 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 RFPL2O75678 378 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 PPP1R37O75864 691 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 SMC2O95347 1197 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 EFEMP2O95967 443 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 TNNC2P02585 160 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 RPN1P04843 607 aaKnown RBP7.09□□□□□ -1.27
TRAF4-213ENST00000578917 NFICP08651 508 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 TMEM191BP0C7N4 346 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 DLATP10515 647 aaKnown RBP7.09□□□□□ -1.27
TRAF4-213ENST00000578917 ODC1P11926 461 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 CPB1P15086 417 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 TNNI1P19237 187 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 PAX3P23760 479 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 IGFBP6P24592 240 aaPredicted RBP7.09□□□□□ -1.27
TRAF4-213ENST00000578917 LILRA4P59901 499 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 SNRPFP62306 86 aaKnown RBP7.09□□□□□ -1.27
TRAF4-213ENST00000578917 POU5F1Q01860 360 aaKnown RBP7.09□□□□□ -1.27
TRAF4-213ENST00000578917 YWHAHQ04917 246 aaPredicted RBP7.09□□□□□ -1.27
TRAF4-213ENST00000578917 SURF1Q15526 300 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 ZBTB6Q15916 424 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 KNOP1Q1ED39 458 aaKnown RBP7.09□□□□□ -1.27
TRAF4-213ENST00000578917 DUOXA2Q1HG44 320 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 KMT5BQ4FZB7 885 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 VARS2Q5ST30 1063 aaKnown RBP7.09□□□□□ -1.27
TRAF4-213ENST00000578917 SPATA1Q5VX52 437 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 C9orf57Q5W0N0 161 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 ZNF280DQ6N043 979 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 KRBA2Q6ZNG9 492 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 CCDC149Q6ZUS6 474 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 OTOP3Q7RTS5 596 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 GPR149Q86SP6 731 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 RNF135Q8IUD6 432 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 RNF168Q8IYW5 571 aaPredicted RBP7.09□□□□□ -1.27
TRAF4-213ENST00000578917 THEM5Q8N1Q8 247 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 CSGALNACT2Q8N6G5 542 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 XXYLT1Q8NBI6 393 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 GLIS3Q8NEA6 775 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 ZNF461Q8TAF7 563 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 ZNF507Q8TCN5 953 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 CCDC127Q96BQ5 260 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 SUSD3Q96L08 255 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 FNBP1Q96RU3 617 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 C1QTNF1Q9BXJ1 281 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 FGFBP2Q9BYJ0 223 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 PDE11AQ9HCR9 933 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 CD320Q9NPF0 282 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 HSPBP1Q9NZL4 362 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 PCDHB8Q9UN66 801 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 AGAP1Q9UPQ3 857 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 HPSEQ9Y251 543 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 C2CD2Q9Y426 696 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 BACE2Q9Y5Z0 518 aa7.09□□□□□ -1.27
TRAF4-213ENST00000578917 CYB561D2O14569 222 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 MEFVO15553 781 aaPredicted RBP7.08□□□□□ -1.28
TRAF4-213ENST00000578917 ADAM12O43184 909 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 DCXO43602 365 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 FAM189A1O60320 539 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 HUS1O60921 280 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 ZMYND10O75800 440 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 C1RP00736 705 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 LRG1P02750 347 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 C8AP07357 584 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 ADRB2P07550 413 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 HNRNPA1P09651 372 aaKnown RBP eCLIP7.08□□□□□ -1.28
TRAF4-213ENST00000578917 LRPAP1P30533 357 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 GBP2P32456 591 aaPredicted RBP7.08□□□□□ -1.28
TRAF4-213ENST00000578917 PNPLA4P41247 253 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 TAF6P49848 677 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 RBP5P82980 135 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 BFSP1Q12934 665 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 MYO1EQ12965 1108 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 STK4Q13043 487 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 RAB33AQ14088 237 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 SNRNP35Q16560 246 aaKnown RBP7.08□□□□□ -1.28
TRAF4-213ENST00000578917 UVSSAQ2YD98 709 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 SV2CQ496J9 727 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 OVOS1Q6IE37 1185 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 LILRA6Q6PI73 481 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 CD300LGQ6UXG3 332 aa7.08□□□□□ -1.28
TRAF4-213ENST00000578917 CRELD2Q6UXH1 353 aaPredicted RBP7.08□□□□□ -1.28
TRAF4-213ENST00000578917 CYP26C1Q6V0L0 522 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms