RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 PIP4K2CQ8TBX8 421 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 SLC5A5Q92911 643 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 TMEM209Q96SK2 561 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 LRRC3Q9BY71 257 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 GOLGA2P5Q9HBQ8 144 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 COL6A6A6NMZ7 2263 aa12.3□□□□□ -0.44
GGA3-206ENST00000578773 A0A1W2PRU2 124 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 TTLL13PA6NNM8 815 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 H0Y626 953 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 ZNF197O14709 1029 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 GAS7O60861 476 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 TRIM16O95361 564 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 ITPKBP27987 946 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 DGKEP52429 567 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 MBTD1Q05BQ5 628 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 TWF1Q12792 350 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 LRCH2Q5VUJ6 765 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 PCSK4Q6UW60 755 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 TMC8Q8IU68 726 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 ARID3BQ8IVW6 561 aaPredicted RBP12.29□□□□□ -0.44
GGA3-206ENST00000578773 RPLP0P6Q8NHW5 317 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 EXOC6Q8TAG9 804 aa12.29□□□□□ -0.44
GGA3-206ENST00000578773 POLR3CQ9BUI4 534 aaPredicted RBP12.29□□□□□ -0.44
GGA3-206ENST00000578773 TRIM6Q9C030 488 aaPredicted RBP12.29□□□□□ -0.44
GGA3-206ENST00000578773 SMG9Q9H0W8 520 aaKnown RBP12.29□□□□□ -0.44
GGA3-206ENST00000578773 CCDC69A6NI79 296 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 PSMD10O75832 226 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 FTH1P19P0C7X4 201 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 CD59P13987 128 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 PTGER3P43115 390 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 JAK3P52333 1124 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 EPHA5P54756 1037 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 DMC1Q14565 340 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 KARSQ15046 597 aaKnown RBP12.28□□□□□ -0.44
GGA3-206ENST00000578773 CYP4A22Q5TCH4 519 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 TRIM68Q6AZZ1 485 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 C1orf228Q6PIY5 440 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 B3GNT9Q6UX72 402 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 SLCO6A1Q86UG4 719 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 FERMT3Q86UX7 667 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 TCEAL8Q8IYN2 117 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 CAMKK1Q8N5S9 505 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 FANCBQ8NB91 859 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 ZNF461Q8TAF7 563 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 PSPC1Q8WXF1 523 aaKnown RBP12.28□□□□□ -0.44
GGA3-206ENST00000578773 ADAMTS14Q8WXS8 1223 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 GTPBP2Q9BX10 602 aaKnown RBP12.28□□□□□ -0.44
GGA3-206ENST00000578773 TEKT3Q9BXF9 490 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 DHX33Q9H6R0 707 aaKnown RBP12.28□□□□□ -0.44
GGA3-206ENST00000578773 HPS4Q9NQG7 708 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 BARHL2Q9NY43 387 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 EVLQ9UI08 416 aaPredicted RBP12.28□□□□□ -0.44
GGA3-206ENST00000578773 RCAN3Q9UKA8 241 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 USP20Q9Y2K6 914 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 BACE2Q9Y5Z0 518 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 V9GY48 417 aaPredicted RBP12.28□□□□□ -0.44
GGA3-206ENST00000578773 CITO14578 2027 aa12.28□□□□□ -0.44
GGA3-206ENST00000578773 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 UPK3BL1B0FP48 263 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 UPK3BL2E5RIL1 263 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 INO80B-WBP1J3KQ70 363 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 EML1O00423 815 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 ZBTB39O15060 712 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 TBX3O15119 743 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 VNN2O95498 520 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 APBB3O95704 486 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 CIITAP33076 1130 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 CLCNKBP51801 687 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 PTENP60484 403 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 SRSF1Q07955 248 aaKnown RBP eCLIP12.27□□□□□ -0.45
GGA3-206ENST00000578773 CYP4F3Q08477 520 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 ZNF423Q2M1K9 1284 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 GLRA4Q5JXX5 417 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 RTL10Q7L3V2 364 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 TMEFF1Q8IYR6 380 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 RIN3Q8TB24 985 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 ASAP3Q8TDY4 903 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 RLN3Q8WXF3 142 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 DCBLD2Q96PD2 775 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 XPNPEP1Q9NQW7 623 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 U3KPZ7 1027 aaPredicted RBP12.27□□□□□ -0.45
GGA3-206ENST00000578773 DOPEY2Q9Y3R5 2298 aa12.27□□□□□ -0.45
GGA3-206ENST00000578773 MYO18AQ92614 2054 aaKnown RBP12.26□□□□□ -0.45
GGA3-206ENST00000578773 TMEM131Q92545 1883 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 A0A087WV48 116 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 SH3BP5O60239 455 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 RECQL4O94761 1208 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 HNRNPLP14866 589 aaKnown RBP eCLIP12.26□□□□□ -0.45
GGA3-206ENST00000578773 ATF2P15336 505 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 AXLP30530 894 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 SFNP31947 248 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 ELF1P32519 619 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 CAPSQ13938 189 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 EMC2Q15006 297 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 ITPRIPL2Q3MIP1 535 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 ARHGAP29Q52LW3 1261 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 SLC8B1Q6J4K2 584 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 PDXDC1Q6P996 788 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 TMEM130Q8N3G9 435 aa12.26□□□□□ -0.45
GGA3-206ENST00000578773 CCDC51Q96ER9 411 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms