RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 NAB2Q15742 525 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ZACNQ401N2 412 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 SV2CQ496J9 727 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 VWA3BQ502W6 1294 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 WDR44Q5JSH3 913 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 SV2AQ7L0J3 742 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 IRF2BP1Q8IU81 584 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 COLGALT2Q8IYK4 626 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 LRRC52Q8N7C0 313 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 FBXL13Q8NEE6 735 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 OR5B17Q8NGF7 314 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PLEKHO2Q8TD55 490 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TAF4BQ92750 862 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 C18orf25Q96B23 403 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TMEM169Q96HH4 297 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 HSD3B7Q9H2F3 369 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 NDST4Q9H3R1 872 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 AGAP1Q9UPQ3 857 aa12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MRPL42Q9Y6G3 142 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MYH10P35580 1976 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TSC2P49815 1807 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TTC28Q96AY4 2481 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 VWA8A3KMH1 1905 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 MYO9BQ13459 2157 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 GTPBP10A4D1E9 387 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TMEM189-UBE2V1I3L0A0 370 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 NRP1O14786 923 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PMM2O15305 246 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 MEFVO15553 781 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TADA2AO75478 443 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 DDHD2O94830 711 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 C4BPAP04003 597 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 RB1P06400 928 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 POLR2BP30876 1174 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CLCNKBP51801 687 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 AFF1P51825 1210 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 RABGGTBP53611 331 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 COPB1P53618 953 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 WNT7BP56706 349 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 BCAR1P56945 870 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 KRT17Q04695 432 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PPP3CAQ08209 521 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 NCOA4Q13772 614 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 BMS1Q14692 1282 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 UPP1Q16831 310 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SGSM1Q2NKQ1 1148 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 C9orf57Q5W0N0 161 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 KCNT2Q6UVM3 1135 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 GBP6Q6ZN66 633 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 GAS2L3Q86XJ1 694 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 ZNF280BQ86YH2 543 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 C1orf127Q8N9H9 656 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 COLGALT1Q8NBJ5 622 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CLP1Q92989 425 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 FAM81BQ96LP2 452 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PLVAPQ9BX97 442 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PBX4Q9BYU1 374 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 DNAI2Q9GZS0 605 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 VPS16Q9H269 839 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TTYH1Q9H313 450 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CWH43Q9H720 699 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SLC28A3Q9HAS3 691 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 GOLGA2P5Q9HBQ8 144 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TAB2Q9NYJ8 693 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PLAGL2Q9UPG8 496 aa12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PRG3Q9Y2Y8 225 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SF3B1O75533 1304 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PTPRJQ12913 1337 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 LINC01553A4QN01 128 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 GRXCR1A8MXD5 290 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PIRO00625 290 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 B3GAT3O94766 335 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 STAU1O95793 577 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CA3P07451 260 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 GALTP07902 379 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CTNNB1P35222 781 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TNNC1P63316 161 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SOX4Q06945 474 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 UVSSAQ2YD98 709 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 ZNF699Q32M78 642 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TDRD10Q5VZ19 366 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PPP2R2DQ66LE6 453 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 DSTYKQ6XUX3 929 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 ZNF516Q92618 1163 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 HPDLQ96IR7 371 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 C11orf84Q9BUA3 381 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CXCL16Q9H2A7 254 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 RAB20Q9NX57 234 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SPG21Q9NZD8 308 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 DNAJB4Q9UDY4 337 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PUF60Q9UHX1 559 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 ADAM28Q9UKQ2 775 aa12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 COL4A4P53420 1690 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-210ENST00000578733 ANO9A1A5B4 782 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 RBAK-RBAKDNI3L0D1 243 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 HUS1O60921 280 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 HLA-DRAP01903 254 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 ODC1P11926 461 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 ATP1A3P13637 1013 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms