RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 KMT5AQ9NQR1 393 aa22.97■■□□□ 1.27
TSEN54-205ENST00000578415 NDRG2Q9UN36 371 aaKnown RBP22.97■■□□□ 1.27
TSEN54-205ENST00000578415 F5P12259 2224 aa22.96■■□□□ 1.27
TSEN54-205ENST00000578415 TDGF1P13385 188 aa22.96■■□□□ 1.27
TSEN54-205ENST00000578415 MPZL3Q6UWV2 235 aa22.96■■□□□ 1.27
TSEN54-205ENST00000578415 VITQ6UXI7 678 aa22.96■■□□□ 1.27
TSEN54-205ENST00000578415 MAP4K3Q8IVH8 894 aa22.96■■□□□ 1.27
TSEN54-205ENST00000578415 ZBTB45Q96K62 511 aaPredicted RBP22.96■■□□□ 1.27
TSEN54-205ENST00000578415 CHRDQ9H2X0 955 aa22.96■■□□□ 1.27
TSEN54-205ENST00000578415 CEP72Q9P209 647 aa22.96■■□□□ 1.27
TSEN54-205ENST00000578415 PP2D1A8MPX8 630 aa22.95■■□□□ 1.26
TSEN54-205ENST00000578415 MAN2B1O00754 1011 aa22.95■■□□□ 1.26
TSEN54-205ENST00000578415 NCANO14594 1321 aa22.95■■□□□ 1.26
TSEN54-205ENST00000578415 HARSP12081 509 aaKnown RBP22.95■■□□□ 1.26
TSEN54-205ENST00000578415 TGM1P22735 817 aa22.95■■□□□ 1.26
TSEN54-205ENST00000578415 CYP4A22Q5TCH4 519 aa22.95■■□□□ 1.26
TSEN54-205ENST00000578415 ZNF280DQ6N043 979 aa22.95■■□□□ 1.26
TSEN54-205ENST00000578415 RINT1Q6NUQ1 792 aa22.95■■□□□ 1.26
TSEN54-205ENST00000578415 GPR161Q8N6U8 529 aaKnown RBP22.95■■□□□ 1.26
TSEN54-205ENST00000578415 SMARCD2Q92925 531 aa22.95■■□□□ 1.26
TSEN54-205ENST00000578415 LLPHQ9BRT6 129 aaKnown RBP22.95■■□□□ 1.26
TSEN54-205ENST00000578415 TCHPQ9BT92 498 aa22.95■■□□□ 1.26
TSEN54-205ENST00000578415 ZNF334Q9HCZ1 680 aaPredicted RBP22.95■■□□□ 1.26
TSEN54-205ENST00000578415 AFF4Q9UHB7 1163 aaKnown RBP22.95■■□□□ 1.26
TSEN54-205ENST00000578415 LIMCH1Q9UPQ0 1083 aa22.95■■□□□ 1.26
TSEN54-205ENST00000578415 DNM3Q9UQ16 869 aa22.95■■□□□ 1.26
TSEN54-205ENST00000578415 RBM19Q9Y4C8 960 aaKnown RBP22.95■■□□□ 1.26
TSEN54-205ENST00000578415 PSMC3P17980 439 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 MCM4P33991 863 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 TOB1P50616 345 aaPredicted RBP22.94■■□□□ 1.26
TSEN54-205ENST00000578415 EPHA5P54756 1037 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 TWF1Q12792 350 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 PTGDRQ13258 359 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 SLC10A6Q3KNW5 377 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 MAMSTRQ6ZN01 415 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 C1orf186Q6ZWK4 172 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 KCNK18Q7Z418 384 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 TMEM130Q8N3G9 435 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 DDX12PQ92771 950 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 IRF7Q92985 503 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 DRC1Q96MC2 740 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 TBC1D32Q96NH3 1257 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 FAM126AQ9BYI3 521 aaPredicted RBP22.94■■□□□ 1.26
TSEN54-205ENST00000578415 TRPV5Q9NQA5 729 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 NOL7Q9UMY1 257 aaKnown RBP22.94■■□□□ 1.26
TSEN54-205ENST00000578415 STK24Q9Y6E0 443 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 COL4A2P08572 1712 aa22.94■■□□□ 1.26
TSEN54-205ENST00000578415 SLC16A4O15374 487 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 GJA1P17302 382 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 CDC25AP30304 524 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 GDI1P31150 447 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 VIPR2P41587 438 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 GNL2Q13823 731 aaKnown RBP22.93■■□□□ 1.26
TSEN54-205ENST00000578415 IL17AQ16552 155 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 SEZ6Q53EL9 994 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 IQCEQ6IPM2 695 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 ELMOD1Q8N336 334 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 APPL2Q8NEU8 664 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 SECISBP2LQ93073 1101 aaKnown RBP22.93■■□□□ 1.26
TSEN54-205ENST00000578415 ZNF512Q96ME7 567 aaPredicted RBP22.93■■□□□ 1.26
TSEN54-205ENST00000578415 C17orf75Q9HAS0 396 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 TRPV4Q9HBA0 871 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 TUBGCP4Q9UGJ1 667 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 MAFFQ9ULX9 164 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 PCDHB6Q9Y5E3 794 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 PIAS3Q9Y6X2 628 aa22.93■■□□□ 1.26
TSEN54-205ENST00000578415 SFI1A8K8P3 1242 aa22.92■■□□□ 1.26
TSEN54-205ENST00000578415 MYL4P12829 197 aa22.92■■□□□ 1.26
TSEN54-205ENST00000578415 ATXN1P54253 815 aaKnown RBP22.92■■□□□ 1.26
TSEN54-205ENST00000578415 RNF19BQ6ZMZ0 732 aa22.92■■□□□ 1.26
TSEN54-205ENST00000578415 ZSCAN18Q8TBC5 510 aaPredicted RBP22.92■■□□□ 1.26
TSEN54-205ENST00000578415 DEPDC1BQ8WUY9 529 aa22.92■■□□□ 1.26
TSEN54-205ENST00000578415 FAM3CQ92520 227 aa22.92■■□□□ 1.26
TSEN54-205ENST00000578415 NTPCRQ9BSD7 190 aaKnown RBP22.92■■□□□ 1.26
TSEN54-205ENST00000578415 MMTAG2Q9BU76 263 aaKnown RBP22.92■■□□□ 1.26
TSEN54-205ENST00000578415 RAB34Q9BZG1 259 aa22.92■■□□□ 1.26
TSEN54-205ENST00000578415 PARD6AQ9NPB6 346 aa22.92■■□□□ 1.26
TSEN54-205ENST00000578415 ANKFY1Q9P2R3 1169 aa22.92■■□□□ 1.26
TSEN54-205ENST00000578415 PCDHB8Q9UN66 801 aa22.92■■□□□ 1.26
TSEN54-205ENST00000578415 ARNTLO00327 626 aa22.91■■□□□ 1.26
TSEN54-205ENST00000578415 TOM1L1O75674 476 aa22.91■■□□□ 1.26
TSEN54-205ENST00000578415 VNN2O95498 520 aa22.91■■□□□ 1.26
TSEN54-205ENST00000578415 U2AF2P26368 475 aaKnown RBP eCLIP22.91■■□□□ 1.26
TSEN54-205ENST00000578415 HMGN5P82970 282 aaKnown RBP22.91■■□□□ 1.26
TSEN54-205ENST00000578415 LMNB2Q03252 620 aa22.91■■□□□ 1.26
TSEN54-205ENST00000578415 NOLC1Q14978 699 aaKnown RBP eCLIP22.91■■□□□ 1.26
TSEN54-205ENST00000578415 TEAD2Q15562 447 aa22.91■■□□□ 1.26
TSEN54-205ENST00000578415 KRT79Q5XKE5 535 aa22.91■■□□□ 1.26
TSEN54-205ENST00000578415 LEMD2Q8NC56 503 aa22.91■■□□□ 1.26
TSEN54-205ENST00000578415 BEST2Q8NFU1 509 aa22.91■■□□□ 1.26
TSEN54-205ENST00000578415 IER2Q9BTL4 223 aa22.91■■□□□ 1.26
TSEN54-205ENST00000578415 LMAN1LQ9HAT1 526 aa22.91■■□□□ 1.26
TSEN54-205ENST00000578415 ASAH2Q9NR71 780 aa22.91■■□□□ 1.26
TSEN54-205ENST00000578415 YIPF1Q9Y548 306 aa22.91■■□□□ 1.26
TSEN54-205ENST00000578415 SPTBN2O15020 2390 aa22.9■■□□□ 1.26
TSEN54-205ENST00000578415 SEC24BO95487 1268 aa22.9■■□□□ 1.26
TSEN54-205ENST00000578415 CPB1P15086 417 aa22.9■■□□□ 1.26
TSEN54-205ENST00000578415 SDHBP21912 280 aa22.9■■□□□ 1.26
TSEN54-205ENST00000578415 GUCY2CP25092 1073 aa22.9■■□□□ 1.26
TSEN54-205ENST00000578415 TMEM161BQ8NDZ6 487 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms