RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 MICU3Q86XE3 530 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 ECHDC2Q86YB7 292 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 ZDHHC14Q8IZN3 488 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 MRPL43Q8N983 215 aaKnown RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 DTWD2Q8NBA8 298 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 ST13P5Q8NFI4 369 aaPredicted RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 SLC22A17Q8WUG5 538 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 RSAD2Q8WXG1 361 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 SLC7A3Q8WY07 619 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 RIN2Q8WYP3 895 aaPredicted RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 LPPQ93052 612 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 TRIM11Q96F44 468 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 CRELD1Q96HD1 420 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 MAP3K14Q99558 947 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 SDF4Q9BRK5 362 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 IRF2BPLQ9H1B7 796 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 ADAMTS10Q9H324 1103 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 MFSD1Q9H3U5 465 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 SOX17Q9H6I2 414 aaPredicted RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 ELAC1Q9H777 363 aaKnown RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 NGRNQ9NPE2 291 aaKnown RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 ZNF302Q9NR11 478 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 SPG21Q9NZD8 308 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 DNAJB4Q9UDY4 337 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 DUSP12Q9UNI6 340 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 SAMM50Q9Y512 469 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 RBM8AQ9Y5S9 174 aaKnown RBP4.47□□□□□ -1.69
PTPRM-206ENST00000578093 ACACBO00763 2458 aa4.47□□□□□ -1.69
PTPRM-206ENST00000578093 NOTCH4Q99466 2003 aa4.46□□□□□ -1.69
PTPRM-206ENST00000578093 ZZEF1O43149 2961 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 A0A0A0MRY4 1105 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 TMEM150BA6NC51 233 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 MEIS1O00470 390 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 EDIL3O43854 480 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 ZNF862O60290 1169 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 ZC3H11AO75152 810 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTPRM-206ENST00000578093 LRRN2O75325 713 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 B3GALT4O96024 378 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 SPATA31C1P0DKV0 1188 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 MYBP10242 640 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 CTSAP10619 480 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 GLULP15104 373 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 SMARCA1P28370 1054 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 KIF5BP33176 963 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 PPM1AP35813 382 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 MTHFRP42898 656 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 SLC11A1P49279 550 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 SLC26A2P50443 739 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 ST13P50502 369 aaKnown RBP4.46□□□□□ -1.7
PTPRM-206ENST00000578093 GPC3P51654 580 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 NAPAP54920 295 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 NLRP11P59045 1033 aaKnown RBP4.46□□□□□ -1.7
PTPRM-206ENST00000578093 GSTM4Q03013 218 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 ITIH3Q06033 890 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 MRPL58Q14197 206 aaKnown RBP4.46□□□□□ -1.7
PTPRM-206ENST00000578093 SART3Q15020 963 aaKnown RBP4.46□□□□□ -1.7
PTPRM-206ENST00000578093 SETDB1Q15047 1291 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 PTPN14Q15678 1187 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 CEP55Q53EZ4 464 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 ZNF484Q5JVG2 852 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 CES5AQ6NT32 575 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 SWSAP1Q6NVH7 229 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 TXNDC11Q6PKC3 985 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 KIAA2013Q8IYS2 634 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 ABI1Q8IZP0 508 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 FMR1NBQ8N0W7 255 aaPredicted RBP4.46□□□□□ -1.7
PTPRM-206ENST00000578093 VPS52Q8N1B4 723 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 NME8Q8N427 588 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 DCLK2Q8N568 766 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 METTL13Q8N6R0 699 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 TMEM87AQ8NBN3 555 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 C3orf58Q8NDZ4 430 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 EXOC6Q8TAG9 804 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 CRYGNQ8WXF5 182 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 GJA10Q969M2 543 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 TCEANC2Q96MN5 208 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 NECTIN4Q96NY8 510 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 NACC1Q96RE7 527 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 NRDE2Q9H7Z3 1164 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 RIC8AQ9NPQ8 531 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 PUF60Q9UHX1 559 aaKnown RBP4.46□□□□□ -1.7
PTPRM-206ENST00000578093 DBR1Q9UK59 544 aaKnown RBP4.46□□□□□ -1.7
PTPRM-206ENST00000578093 AKT3Q9Y243 479 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 CHD6Q8TD26 2715 aa4.46□□□□□ -1.7
PTPRM-206ENST00000578093 TICRRQ7Z2Z1 1910 aa4.45□□□□□ -1.7
PTPRM-206ENST00000578093 A0A0U1RQF3 1178 aa4.45□□□□□ -1.7
PTPRM-206ENST00000578093 CCDC69A6NI79 296 aa4.45□□□□□ -1.7
PTPRM-206ENST00000578093 F8W810 466 aa4.45□□□□□ -1.7
PTPRM-206ENST00000578093 IPO5O00410 1097 aaKnown RBP4.45□□□□□ -1.7
PTPRM-206ENST00000578093 SLC27A2O14975 620 aa4.45□□□□□ -1.7
PTPRM-206ENST00000578093 MAFGO15525 162 aa4.45□□□□□ -1.7
PTPRM-206ENST00000578093 RFPL2O75678 378 aa4.45□□□□□ -1.7
PTPRM-206ENST00000578093 CXCL14O95715 111 aa4.45□□□□□ -1.7
PTPRM-206ENST00000578093 SSBP05455 408 aaKnown RBP eCLIP4.45□□□□□ -1.7
PTPRM-206ENST00000578093 DCNP07585 359 aaKnown RBP4.45□□□□□ -1.7
PTPRM-206ENST00000578093 GALTP07902 379 aa4.45□□□□□ -1.7
PTPRM-206ENST00000578093 CNPP09543 421 aaKnown RBP4.45□□□□□ -1.7
PTPRM-206ENST00000578093 DARSP14868 501 aaKnown RBP4.45□□□□□ -1.7
PTPRM-206ENST00000578093 CD68P34810 354 aaPredicted RBP4.45□□□□□ -1.7
PTPRM-206ENST00000578093 CLCN4P51793 760 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms