RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 FAM228BP0C875 321 aa19.92■□□□□ 0.78
PRKCA-203ENST00000578063 KCNE1P15382 129 aa19.92■□□□□ 0.78
PRKCA-203ENST00000578063 RBP5P82980 135 aa19.92■□□□□ 0.78
PRKCA-203ENST00000578063 C10orf76Q5T2E6 689 aa19.92■□□□□ 0.78
PRKCA-203ENST00000578063 SYT11Q9BT88 431 aa19.92■□□□□ 0.78
PRKCA-203ENST00000578063 TSGA10Q9BZW7 698 aa19.92■□□□□ 0.78
PRKCA-203ENST00000578063 UBQLN1Q9UMX0 589 aaKnown RBP19.92■□□□□ 0.78
PRKCA-203ENST00000578063 CITO14578 2027 aa19.92■□□□□ 0.78
PRKCA-203ENST00000578063 UMODL1Q5DID0 1318 aa19.91■□□□□ 0.78
PRKCA-203ENST00000578063 STAU1O95793 577 aaKnown RBP19.91■□□□□ 0.78
PRKCA-203ENST00000578063 CD4P01730 458 aa19.91■□□□□ 0.78
PRKCA-203ENST00000578063 TFRCP02786 760 aaKnown RBP19.91■□□□□ 0.78
PRKCA-203ENST00000578063 KRT5P13647 590 aa19.91■□□□□ 0.78
PRKCA-203ENST00000578063 TNNT1P13805 278 aa19.91■□□□□ 0.78
PRKCA-203ENST00000578063 POLR2BP30876 1174 aaKnown RBP19.91■□□□□ 0.78
PRKCA-203ENST00000578063 DSC3Q14574 896 aa19.91■□□□□ 0.78
PRKCA-203ENST00000578063 ZBTB6Q15916 424 aa19.91■□□□□ 0.78
PRKCA-203ENST00000578063 ZNF667Q5HYK9 610 aa19.91■□□□□ 0.78
PRKCA-203ENST00000578063 ZMAT2Q96NC0 199 aaKnown RBP19.91■□□□□ 0.78
PRKCA-203ENST00000578063 RNF39Q9H2S5 420 aa19.91■□□□□ 0.78
PRKCA-203ENST00000578063 LZTFL1Q9NQ48 299 aa19.91■□□□□ 0.78
PRKCA-203ENST00000578063 TLR3O15455 904 aaKnown RBP19.9■□□□□ 0.78
PRKCA-203ENST00000578063 CYP26A1O43174 497 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 SELPP16109 830 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 ACO1P21399 889 aaKnown RBP19.9■□□□□ 0.78
PRKCA-203ENST00000578063 ARHGAP25P42331 645 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 MAGEA1P43355 309 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 PDE6CP51160 858 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 BPIFB4P59827 614 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 YWHAEP62258 255 aaKnown RBP19.9■□□□□ 0.78
PRKCA-203ENST00000578063 LRRC8DQ7L1W4 858 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 EPS8L1Q8TE68 723 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 OSBPL7Q9BZF2 842 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 CNTN6Q9UQ52 1028 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 ATP8B3O60423 1300 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 KRT86O43790 486 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 SKIP12755 728 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 ITGA4P13612 1032 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 P4HA1P13674 534 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 KIF5AQ12840 1032 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 SCARA3Q6AZY7 606 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 AGPAT1Q99943 283 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 NAGPAQ9UK23 515 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 AGAP1Q9UPQ3 857 aa19.9■□□□□ 0.78
PRKCA-203ENST00000578063 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.9■□□□□ 0.78
PRKCA-203ENST00000578063 A0A0U1RQJ8 604 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 SMIM28A0A1B0GU29 152 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 PITPNM1O00562 1244 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 DDX3XO00571 662 aaKnown RBP eCLIP19.89■□□□□ 0.774e-20■■■■■ 47.3
PRKCA-203ENST00000578063 ZNF623O75123 536 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 CYP11B1P15538 503 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 CYP3A5P20815 502 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 TNFAIP3P21580 790 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 ASPAP45381 313 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 GLRA4Q5JXX5 417 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 CCDC122Q5T0U0 273 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 MRPL10Q7Z7H8 261 aaKnown RBP19.89■□□□□ 0.77
PRKCA-203ENST00000578063 UBR7Q8N806 425 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 SLC30A5Q8TAD4 765 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 ATRIPQ8WXE1 791 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 HPDLQ96IR7 371 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 KLK14Q9P0G3 267 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 NOCTQ9UK39 431 aaKnown RBP19.89■□□□□ 0.77
PRKCA-203ENST00000578063 NENFQ9UMX5 172 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 PCDHB4Q9Y5E5 795 aa19.89■□□□□ 0.77
PRKCA-203ENST00000578063 KIF5CO60282 957 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 MNX1P50219 401 aaPredicted RBP19.88■□□□□ 0.77
PRKCA-203ENST00000578063 GUCY2FP51841 1108 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 ETF1P62495 437 aaKnown RBP19.88■□□□□ 0.77
PRKCA-203ENST00000578063 MYO1EQ12965 1108 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 MBTPS1Q14703 1052 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 NAB2Q15742 525 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 WDR72Q3MJ13 1102 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 ALKBH5Q6P6C2 394 aaKnown RBP19.88■□□□□ 0.77
PRKCA-203ENST00000578063 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.88■□□□□ 0.77
PRKCA-203ENST00000578063 FAM43BQ6ZT52 329 aaPredicted RBP19.88■□□□□ 0.77
PRKCA-203ENST00000578063 ANKRD33Q7Z3H0 272 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 SLC47A2Q86VL8 602 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 GLYCTKQ8IVS8 523 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 LRRC52Q8N7C0 313 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 ANKLE1Q8NAG6 615 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 OLIG1Q8TAK6 271 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 LNX1Q8TBB1 728 aaPredicted RBP19.88■□□□□ 0.77
PRKCA-203ENST00000578063 CXCL16Q9H2A7 254 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 MYO1AQ9UBC5 1043 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 TUBGCP4Q9UGJ1 667 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 GIT1Q9Y2X7 761 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 A0A0U1RQF3 1178 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 PJA2O43164 708 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 MGEA5O60502 916 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 PQBP1O60828 265 aaKnown RBP19.88■□□□□ 0.77
PRKCA-203ENST00000578063 TMEM270Q6UE05 265 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 SLC39A5Q6ZMH5 540 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 NOP9Q86U38 636 aaKnown RBP19.88■□□□□ 0.77
PRKCA-203ENST00000578063 ZNF677Q86XU0 584 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 SLC20A1Q8WUM9 679 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 ADAM2Q99965 735 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 BCO2Q9BYV7 579 aa19.88■□□□□ 0.77
PRKCA-203ENST00000578063 FAM124BQ9H5Z6 455 aaPredicted RBP19.88■□□□□ 0.77
PRKCA-203ENST00000578063 NXF1Q9UBU9 619 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms