RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 TNFSF9P41273 254 aa16.27■□□□□ 0.2
RN7SL560P-201ENST00000577943 GPC5P78333 572 aa16.27■□□□□ 0.2
RN7SL560P-201ENST00000577943 PPP2R3AQ06190 1150 aa16.27■□□□□ 0.2
RN7SL560P-201ENST00000577943 MRPL58Q14197 206 aaKnown RBP16.27■□□□□ 0.2
RN7SL560P-201ENST00000577943 KYAT1Q16773 422 aa16.27■□□□□ 0.2
RN7SL560P-201ENST00000577943 ZNF280DQ6N043 979 aa16.27■□□□□ 0.2
RN7SL560P-201ENST00000577943 NPAS3Q8IXF0 933 aa16.27■□□□□ 0.2
RN7SL560P-201ENST00000577943 LARP4BQ92615 738 aaKnown RBP16.27■□□□□ 0.2
RN7SL560P-201ENST00000577943 DDX12PQ92771 950 aa16.27■□□□□ 0.2
RN7SL560P-201ENST00000577943 RPF1Q9H9Y2 349 aaKnown RBP16.27■□□□□ 0.2
RN7SL560P-201ENST00000577943 UBQLN1Q9UMX0 589 aaKnown RBP16.27■□□□□ 0.2
RN7SL560P-201ENST00000577943 TTC26A0AVF1 554 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 LACTBL1A8MY62 500 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 PROB1E7EW31 1015 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 XPOTO43592 962 aaKnown RBP16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 PDCP20941 246 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 SCP2P22307 547 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 NBL1P41271 181 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 ZNF131P52739 623 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 CUL4AQ13619 759 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 ANGPT1Q15389 498 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 TPGS2Q68CL5 300 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 TCEAL8Q8IYN2 117 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 TMEM130Q8N3G9 435 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 KCNN1Q92952 543 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 FAM212AQ96EL1 285 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 KXD1Q9BQD3 176 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 PCDHB8Q9UN66 801 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 FAM186AA6NE01 2351 aa16.26■□□□□ 0.19
RN7SL560P-201ENST00000577943 OGTO15294 1046 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 SEC24AO95486 1093 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 PIGRP01833 764 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 CPB1P15086 417 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 LRPAP1P30533 357 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 SLC5A9Q2M3M2 681 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 SPECC1Q5M775 1068 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 PHLDB3Q6NSJ2 640 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 ELMOD1Q8N336 334 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 MCRS1Q96EZ8 462 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 SHDQ96IW2 340 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 CORO1BQ9BR76 489 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 MSTO1Q9BUK6 570 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 CCSER1Q9C0I3 900 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 SIT1Q9Y3P8 196 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 INSL5Q9Y5Q6 135 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 CLIC4Q9Y696 253 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 CFAP54Q96N23 3096 aa16.25■□□□□ 0.19
RN7SL560P-201ENST00000577943 FANCMQ8IYD8 2048 aa16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 RIF1Q5UIP0 2472 aaKnown RBP16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 M0QZQ0 153 aa16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 DCNP07585 359 aaKnown RBP16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 CYP3A5P20815 502 aa16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 NMT1P30419 496 aaKnown RBP16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 ABCD1P33897 745 aa16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 DDIT3P35638 169 aa16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 YWHAHQ04917 246 aaPredicted RBP16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 ADCY1Q08828 1119 aa16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 ZBTB6Q15916 424 aa16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 ENOX2Q16206 610 aaKnown RBP16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 ZBTB41Q5SVQ8 909 aa16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 DSTYKQ6XUX3 929 aa16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 FRMD5Q7Z6J6 570 aa16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 KRI1Q8N9T8 703 aaKnown RBP16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 EPSTI1Q96J88 318 aa16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 AVENQ9NQS1 362 aaPredicted RBP16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 GDE1Q9NZC3 331 aa16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 AFF4Q9UHB7 1163 aaKnown RBP16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 TIMM13Q9Y5L4 95 aaPredicted RBP16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 ZFHX2Q9C0A1 2572 aaPredicted RBP16.24■□□□□ 0.19
RN7SL560P-201ENST00000577943 A0A0B4J269 797 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 ZNF197O14709 1029 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 FAM189A1O60320 539 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 CEBPBP17676 345 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 GUCY2FP51841 1108 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 STARD6P59095 220 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 GTF2BQ00403 316 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 PFKPQ01813 784 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 SNW1Q13573 536 aaKnown RBP16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 PTPAQ15257 358 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 IQCEQ6IPM2 695 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 RNF19BQ6ZMZ0 732 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 PDZD4Q76G19 769 aaPredicted RBP16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 DYMQ7RTS9 669 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 ASCL5Q7RTU5 278 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 USP37Q86T82 979 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 MAP4K3Q8IVH8 894 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 CD302Q8IX05 232 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 BEST2Q8NFU1 509 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 NKD2Q969F2 451 aaPredicted RBP16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 ZNF512Q96ME7 567 aaPredicted RBP16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 TSPAN18Q96SJ8 248 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 FIZ1Q96SL8 496 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 FOXQ1Q9C009 403 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 CCDC39Q9UFE4 941 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 MAFFQ9ULX9 164 aa16.23■□□□□ 0.19
RN7SL560P-201ENST00000577943 ZNF638Q14966 1978 aaKnown RBP16.22■□□□□ 0.19
RN7SL560P-201ENST00000577943 TSC2P49815 1807 aa16.22■□□□□ 0.19
RN7SL560P-201ENST00000577943 ECI2O75521 394 aa16.22■□□□□ 0.19
RN7SL560P-201ENST00000577943 OAZ2O95190 189 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms