RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 BCL7CQ8WUZ0 217 aaPredicted RBP13.71□□□□□ -0.21
MKS1-206ENST00000577824 IGSF21Q96ID5 467 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 C17orf80Q9BSJ5 609 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 SLC28A3Q9HAS3 691 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 LZTS1Q9Y250 596 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 PCDHB12Q9Y5F1 795 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 EYSQ5T1H1 3165 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 LRRC10BA6NIK2 292 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 SOX1O00570 391 aaPredicted RBP13.7□□□□□ -0.22
MKS1-206ENST00000577824 PPEF2O14830 753 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 N4BP1O75113 896 aaKnown RBP13.7□□□□□ -0.22
MKS1-206ENST00000577824 VNN1O95497 513 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 ALDH2P05091 517 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 ITGB3P05106 788 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 CTNNB1P35222 781 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 PBX3P40426 434 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 MXI1P50539 228 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 MAN2A1Q16706 1144 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 CBWD6Q4V339 395 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 EPC2Q52LR7 807 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 CBWD3Q5JTY5 395 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 MIIPQ5JXC2 388 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 CBWD5Q5RIA9 395 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 KRT39Q6A163 491 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 DCLRE1AQ6PJP8 1040 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 APTXQ7Z2E3 356 aaKnown RBP13.7□□□□□ -0.22
MKS1-206ENST00000577824 SPRED2Q7Z698 418 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 LUZP1Q86V48 1076 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 TMEM130Q8N3G9 435 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 FAM84AQ96KN4 292 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 ZNF560Q96MR9 790 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 TUBGCP2Q9BSJ2 902 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 C11orf84Q9BUA3 381 aaPredicted RBP13.7□□□□□ -0.22
MKS1-206ENST00000577824 XYLT2Q9H1B5 865 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 SPG21Q9NZD8 308 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 MAGEC2Q9UBF1 373 aaPredicted RBP13.7□□□□□ -0.22
MKS1-206ENST00000577824 CACNG4Q9UBN1 327 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 LIMA1Q9UHB6 759 aaKnown RBP13.7□□□□□ -0.22
MKS1-206ENST00000577824 ADAM28Q9UKQ2 775 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 FAN1Q9Y2M0 1017 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.7□□□□□ -0.22
MKS1-206ENST00000577824 PLXNA4Q9HCM2 1894 aa13.7□□□□□ -0.22
MKS1-206ENST00000577824 SF3B1O75533 1304 aaKnown RBP eCLIP13.69□□□□□ -0.22
MKS1-206ENST00000577824 REV3LO60673 3130 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 GTPBP10A4D1E9 387 aaKnown RBP13.69□□□□□ -0.22
MKS1-206ENST00000577824 BECN2A8MW95 431 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 F8W810 466 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 FGF18O76093 207 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 B3GAT3O94766 335 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 AFPP02771 609 aaKnown RBP13.69□□□□□ -0.22
MKS1-206ENST00000577824 ITGB1P05556 798 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 POLR2BP30876 1174 aaKnown RBP13.69□□□□□ -0.22
MKS1-206ENST00000577824 ATICP31939 592 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 GCLMP48507 274 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 FMO5P49326 533 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 LILRA4P59901 499 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 RBP5P82980 135 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 UBE3AQ05086 875 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 KCNH2Q12809 1159 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 SPOUT1Q5T280 376 aaKnown RBP13.69□□□□□ -0.22
MKS1-206ENST00000577824 TCERG1LQ5VWI1 586 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 LIMS2Q7Z4I7 341 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 TAF4BQ92750 862 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 COLEC11Q9BWP8 271 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 VN1R3Q9BXE9 311 aa13.69□□□□□ -0.22
MKS1-206ENST00000577824 PRG3Q9Y2Y8 225 aaPredicted RBP13.69□□□□□ -0.22
MKS1-206ENST00000577824 H3BNC9 293 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 M0QZQ0 153 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 SPTLC1O15269 473 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 ASS1P00966 412 aaKnown RBP13.68□□□□□ -0.22
MKS1-206ENST00000577824 CST3P01034 146 aaPredicted RBP13.68□□□□□ -0.22
MKS1-206ENST00000577824 MTIF2P46199 727 aaKnown RBP13.68□□□□□ -0.22
MKS1-206ENST00000577824 TAF6P49848 677 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 ELAVL2Q12926 359 aaKnown RBP13.68□□□□□ -0.22
MKS1-206ENST00000577824 NCOA4Q13772 614 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 KRT31Q15323 416 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 SV2CQ496J9 727 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 HABP4Q5JVS0 413 aaKnown RBP13.68□□□□□ -0.22
MKS1-206ENST00000577824 SCARA3Q6AZY7 606 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 FUT10Q6P4F1 479 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 DDX53Q86TM3 631 aaKnown RBP13.68□□□□□ -0.22
MKS1-206ENST00000577824 GPR65Q8IYL9 337 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 KLHL23Q8NBE8 558 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 FBXL13Q8NEE6 735 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 FBXO22Q8NEZ5 403 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 TMEM169Q96HH4 297 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 FAXDC2Q96IV6 333 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 SUSD3Q96L08 255 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 HERC2P3Q9BVR0 1158 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 GDAP2Q9NXN4 497 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 AGAP1Q9UPQ3 857 aa13.68□□□□□ -0.22
MKS1-206ENST00000577824 NT5C1B-RDH14C9J2C7 533 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 HLA-DRAP01903 254 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 SOD2P04179 222 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 ATP1A3P13637 1013 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 IGFBP6P24592 240 aaPredicted RBP13.67□□□□□ -0.22
MKS1-206ENST00000577824 PIK3CAP42336 1068 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 MYL7Q01449 175 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 BIRC3Q13489 604 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 VWA3BQ502W6 1294 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms