RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 SPATA18Q8TC71 538 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 C18orf25Q96B23 403 aaPredicted RBP13.37□□□□□ -0.27
RARA-208ENST00000577646 CDCA3Q99618 268 aaPredicted RBP13.37□□□□□ -0.27
RARA-208ENST00000577646 HERC2P3Q9BVR0 1158 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 CXCL16Q9H2A7 254 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 ALG13Q9NP73 1137 aaKnown RBP13.37□□□□□ -0.27
RARA-208ENST00000577646 MARCH5Q9NX47 278 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 TMEM63CQ9P1W3 806 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 ARMCX3Q9UH62 379 aaPredicted RBP13.37□□□□□ -0.27
RARA-208ENST00000577646 PRG3Q9Y2Y8 225 aaPredicted RBP13.37□□□□□ -0.27
RARA-208ENST00000577646 NUB1Q9Y5A7 615 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 MTCH2Q9Y6C9 303 aa13.37□□□□□ -0.27
RARA-208ENST00000577646 EPOPA6NHQ4 379 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 NT5C1B-RDH14C9J2C7 533 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 RBAK-RBAKDNI3L0D1 243 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 FSCN2O14926 492 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 STAU1O95793 577 aaKnown RBP13.36□□□□□ -0.27
RARA-208ENST00000577646 CASP4P49662 377 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 BFSP1Q12934 665 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 MYO1EQ12965 1108 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 SV2CQ496J9 727 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 KLHL10Q6JEL2 608 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 KIAA1841Q6NSI8 718 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 CAVIN1Q6NZI2 390 aaKnown RBP13.36□□□□□ -0.27
RARA-208ENST00000577646 TRAPPC11Q7Z392 1133 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 TMC7Q7Z402 723 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 FAM114A1Q8IWE2 563 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 EFCAB13Q8IY85 973 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 MRPL43Q8N983 215 aaKnown RBP13.36□□□□□ -0.27
RARA-208ENST00000577646 APPL2Q8NEU8 664 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 TAF4BQ92750 862 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 CCDC127Q96BQ5 260 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 BORCS6Q96GS4 357 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 FAXDC2Q96IV6 333 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 SUSD3Q96L08 255 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 DUSP9Q99956 384 aaKnown RBP13.36□□□□□ -0.27
RARA-208ENST00000577646 ZBP1Q9H171 429 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 MRPL17Q9NRX2 175 aaKnown RBP13.36□□□□□ -0.27
RARA-208ENST00000577646 THEGQ9P2T0 379 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 HCSTQ9UBK5 93 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 DSEQ9UL01 958 aa13.36□□□□□ -0.27
RARA-208ENST00000577646 PDCD11Q14690 1871 aaKnown RBP13.36□□□□□ -0.27
RARA-208ENST00000577646 KIAA1671Q9BY89 1806 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 M0QZQ0 153 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 PMM2O15305 246 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 KIF4AO95239 1232 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 CXCL14O95715 111 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 URODP06132 367 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 CCDC192P0DO97 292 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 DLATP10515 647 aaKnown RBP13.35□□□□□ -0.27
RARA-208ENST00000577646 FGFR3P22607 806 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 PBX3P40426 434 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 GLUD2P49448 558 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 TAF6P49848 677 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 PMS1P54277 932 aaKnown RBP13.35□□□□□ -0.27
RARA-208ENST00000577646 LILRA4P59901 499 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 DSG1Q02413 1049 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 TPD52L1Q16890 204 aaPredicted RBP13.35□□□□□ -0.27
RARA-208ENST00000577646 DPCR1Q3MIW9 517 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 KIAA0319Q5VV43 1072 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 SMYD5Q6GMV2 418 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 DPH6Q7L8W6 267 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 C1orf127Q8N9H9 656 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 ENOX1Q8TC92 643 aaKnown RBP13.35□□□□□ -0.27
RARA-208ENST00000577646 MICAL1Q8TDZ2 1067 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 GDPD5Q8WTR4 605 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 ATXN2LQ8WWM7 1075 aaKnown RBP13.35□□□□□ -0.27
RARA-208ENST00000577646 PAAF1Q9BRP4 392 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 TTPALQ9BTX7 342 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 EMILIN2Q9BXX0 1053 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 THAP9Q9H5L6 903 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 NSUN3Q9H649 340 aaKnown RBP13.35□□□□□ -0.27
RARA-208ENST00000577646 VRTNQ9H8Y1 702 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 RXFP1Q9HBX9 757 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 ENTPD7Q9NQZ7 604 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 GDAP2Q9NXN4 497 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 FNIP2Q9P278 1114 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 TUBGCP4Q9UGJ1 667 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 CTNND2Q9UQB3 1225 aa13.35□□□□□ -0.27
RARA-208ENST00000577646 TRIP11Q15643 1979 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 LRRIQ3A6PVS8 624 aaPredicted RBP13.34□□□□□ -0.27
RARA-208ENST00000577646 H7C4K7 107 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 P4HA2O15460 535 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 LILRB3O75022 631 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 TYMPP19971 482 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 MRPS5P82675 430 aaKnown RBP13.34□□□□□ -0.27
RARA-208ENST00000577646 SPAG1Q07617 926 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 CETN1Q12798 172 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 TRPC3Q13507 836 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 CAMK1Q14012 370 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 NFKBIBQ15653 356 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 AAK1Q2M2I8 961 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 ZACNQ401N2 412 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 CD300LGQ6UXG3 332 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 ANKS3Q6ZW76 656 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 SPRED2Q7Z698 418 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 TMEM173Q86WV6 379 aaPredicted RBP13.34□□□□□ -0.27
RARA-208ENST00000577646 CXorf38Q8TB03 319 aa13.34□□□□□ -0.27
RARA-208ENST00000577646 BCL7CQ8WUZ0 217 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms