RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 UBQLN1Q9UMX0 589 aaKnown RBP13.79□□□□□ -0.2
SSH2-205ENST00000577483 ARIH1Q9Y4X5 557 aaPredicted RBP13.79□□□□□ -0.2
SSH2-205ENST00000577483 STYXL1Q9Y6J8 313 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 MIA3Q5JRA6 1907 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 COL4A3Q01955 1670 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 PPEF2O14830 753 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 CCL16O15467 120 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 HSP90AA1P07900 732 aaKnown RBP13.79□□□□□ -0.2
SSH2-205ENST00000577483 NFICP08651 508 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 HNRNPA1P09651 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
SSH2-205ENST00000577483 IDEP14735 1019 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 ADSSP30520 456 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 HOXA9P31269 272 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 ABCD1P33897 745 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 KYAT1Q16773 422 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 JADE1Q6IE81 842 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 SHC4Q6S5L8 630 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 GRASPQ7Z6J2 395 aaPredicted RBP13.79□□□□□ -0.2
SSH2-205ENST00000577483 UBALD2Q8IYN6 164 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 RSAD2Q8WXG1 361 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 HVCN1Q96D96 273 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 MFSD14AQ96MC6 490 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 OLFML3Q9NRN5 406 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 HCFC1R1Q9NWW0 138 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 SEL1LQ9UBV2 794 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 FBXL5Q9UKA1 691 aa13.79□□□□□ -0.2
SSH2-205ENST00000577483 GCNT3O95395 438 aa13.78□□□□□ -0.2
SSH2-205ENST00000577483 GAP43P17677 238 aa13.78□□□□□ -0.2
SSH2-205ENST00000577483 CYP3A5P20815 502 aa13.78□□□□□ -0.2
SSH2-205ENST00000577483 VCPP55072 806 aaKnown RBP13.78□□□□□ -0.2
SSH2-205ENST00000577483 ADALQ6DHV7 355 aa13.78□□□□□ -0.2
SSH2-205ENST00000577483 CRELD2Q6UXH1 353 aaPredicted RBP13.78□□□□□ -0.2
SSH2-205ENST00000577483 FBXL6Q8N531 539 aa13.78□□□□□ -0.2
SSH2-205ENST00000577483 ZSWIM2Q8NEG5 633 aa13.78□□□□□ -0.2
SSH2-205ENST00000577483 ZNF461Q8TAF7 563 aa13.78□□□□□ -0.2
SSH2-205ENST00000577483 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
SSH2-205ENST00000577483 EPS15L1Q9UBC2 864 aa13.78□□□□□ -0.2
SSH2-205ENST00000577483 AGO2Q9UKV8 859 aaKnown RBP13.78□□□□□ -0.2
SSH2-205ENST00000577483 NUP210Q8TEM1 1887 aaPredicted RBP13.78□□□□□ -0.2
SSH2-205ENST00000577483 M0QZQ0 153 aa13.77□□□□□ -0.21
SSH2-205ENST00000577483 ABLIM3O94929 683 aa13.77□□□□□ -0.21
SSH2-205ENST00000577483 AARSP49588 968 aaKnown RBP eCLIP13.77□□□□□ -0.21
SSH2-205ENST00000577483 L1TD1Q5T7N2 865 aaKnown RBP13.77□□□□□ -0.21
SSH2-205ENST00000577483 IER5LQ5T953 404 aa13.77□□□□□ -0.21
SSH2-205ENST00000577483 SPATA1Q5VX52 437 aa13.77□□□□□ -0.21
SSH2-205ENST00000577483 GLIS3Q8NEA6 775 aa13.77□□□□□ -0.21
SSH2-205ENST00000577483 ST13P5Q8NFI4 369 aaPredicted RBP13.77□□□□□ -0.21
SSH2-205ENST00000577483 TNMDQ9H2S6 317 aa13.77□□□□□ -0.21
SSH2-205ENST00000577483 PANK4Q9NVE7 773 aa13.77□□□□□ -0.21
SSH2-205ENST00000577483 KBTBD4Q9NVX7 518 aa13.77□□□□□ -0.21
SSH2-205ENST00000577483 PCDHB8Q9UN66 801 aa13.77□□□□□ -0.21
SSH2-205ENST00000577483 POLIQ9UNA4 740 aa13.77□□□□□ -0.21
SSH2-205ENST00000577483 DUSP12Q9UNI6 340 aa13.77□□□□□ -0.21
SSH2-205ENST00000577483 COL4A2P08572 1712 aa13.77□□□□□ -0.21
SSH2-205ENST00000577483 NARSO43776 548 aaKnown RBP13.76□□□□□ -0.21
SSH2-205ENST00000577483 CUTAO60888 179 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 SEC24AO95486 1093 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 LAMP2P13473 410 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 ARPP19P56211 112 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 WNT7BP56706 349 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 TDGQ13569 410 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 UVSSAQ2YD98 709 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 CTXN3Q4LDR2 81 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 SLFN12LQ6IEE8 588 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 ZNF280DQ6N043 979 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 EFCAB13Q8IY85 973 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 POMGNT1Q8WZA1 660 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 HPS3Q969F9 1004 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 DHX58Q96C10 678 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 FAM122AQ96E09 287 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 DNMT3BQ9UBC3 853 aaKnown RBP13.76□□□□□ -0.21
SSH2-205ENST00000577483 TIMM13Q9Y5L4 95 aaPredicted RBP13.76□□□□□ -0.21
SSH2-205ENST00000577483 TICRRQ7Z2Z1 1910 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 PTPRDP23468 1912 aa13.76□□□□□ -0.21
SSH2-205ENST00000577483 H7C4K7 107 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 SPTLC1O15269 473 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 XPOTO43592 962 aaKnown RBP13.75□□□□□ -0.21
SSH2-205ENST00000577483 POU2F2P09086 479 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 ATF2P15336 505 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 FSHRP23945 695 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 DNM1Q05193 864 aaKnown RBP13.75□□□□□ -0.21
SSH2-205ENST00000577483 TMEM132DQ14C87 1099 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 C9orf57Q5W0N0 161 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 SUGP1Q8IWZ8 645 aaKnown RBP13.75□□□□□ -0.21
SSH2-205ENST00000577483 CD302Q8IX05 232 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 ITFG1Q8TB96 612 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 TSPAN18Q96SJ8 248 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 TRIM9Q9C026 710 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.75□□□□□ -0.21
SSH2-205ENST00000577483 IGSF9Q9P2J2 1179 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 PCDHA7Q9UN72 937 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 PATJQ8NI35 1801 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 ZNF638Q14966 1978 aaKnown RBP13.75□□□□□ -0.21
SSH2-205ENST00000577483 ANO9A1A5B4 782 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 ARHGEF37A1IGU5 675 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 PIRO00625 290 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 XYLBO75191 536 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 PRPF6O94906 941 aaKnown RBP13.75□□□□□ -0.21
SSH2-205ENST00000577483 VNN2O95498 520 aa13.75□□□□□ -0.21
SSH2-205ENST00000577483 OR4Q2P0C623 313 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms