RNA–Protein interactions for RNA: ENST00000577241.1

MSI2-205, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-205ENST00000577241 BRSK2Q8IWQ3 736 aa17.05■□□□□ 0.32
MSI2-205ENST00000577241 CMASQ8NFW8 434 aaPredicted RBP17.05■□□□□ 0.32
MSI2-205ENST00000577241 GOLGA5Q8TBA6 731 aa17.05■□□□□ 0.32
MSI2-205ENST00000577241 CACTINQ8WUQ7 758 aaKnown RBP17.05■□□□□ 0.32
MSI2-205ENST00000577241 NECAB3Q96P71 396 aaPredicted RBP17.05■□□□□ 0.32
MSI2-205ENST00000577241 OXCT2Q9BYC2 517 aaPredicted RBP17.05■□□□□ 0.32
MSI2-205ENST00000577241 RHOBTB2Q9BYZ6 727 aa17.05■□□□□ 0.32
MSI2-205ENST00000577241 IKZF4Q9H2S9 585 aa17.05■□□□□ 0.32
MSI2-205ENST00000577241 MTRRQ9UBK8 725 aa17.05■□□□□ 0.32
MSI2-205ENST00000577241 VCANP13611 3396 aa17.05■□□□□ 0.32
MSI2-205ENST00000577241 C19orf67A6NJJ6 358 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 ZNF233A6NK53 670 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 TKTP29401 623 aaKnown RBP17.04■□□□□ 0.32
MSI2-205ENST00000577241 RAB33AQ14088 237 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 KNOP1Q1ED39 458 aaKnown RBP17.04■□□□□ 0.32
MSI2-205ENST00000577241 RARS2Q5T160 578 aaKnown RBP17.04■□□□□ 0.32
MSI2-205ENST00000577241 LILRA6Q6PI73 481 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 PALB2Q86YC2 1186 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 GRAMD1CQ8IYS0 662 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 GLIS3Q8NEA6 775 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 SCFD1Q8WVM8 642 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 CLSTN3Q9BQT9 956 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 CBWD1Q9BRT8 395 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 SLC39A2Q9NP94 309 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 MAN1C1Q9NR34 630 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 ZDHHC7Q9NXF8 308 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 RBAKQ9NYW8 714 aaPredicted RBP17.04■□□□□ 0.32
MSI2-205ENST00000577241 CUL9Q8IWT3 2517 aa17.04■□□□□ 0.32
MSI2-205ENST00000577241 TGM5O43548 720 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 KLRC4O43908 158 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 RPN1P04843 607 aaKnown RBP17.03■□□□□ 0.32
MSI2-205ENST00000577241 NFICP08651 508 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 AARSP49588 968 aaKnown RBP eCLIP17.03■□□□□ 0.328e-6■■■■■ 52.4
MSI2-205ENST00000577241 KMT5BQ4FZB7 885 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 GPR149Q86SP6 731 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 KREMEN2Q8NCW0 462 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 SAAL1Q96ER3 474 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 APOL5Q9BWW9 433 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 GOLPH3LQ9H4A5 285 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 PCIF1Q9H4Z3 704 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 AGPAT3Q9NRZ7 376 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 DPP3Q9NY33 737 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 CHMP5Q9NZZ3 219 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 PCDHB8Q9UN66 801 aa17.03■□□□□ 0.32
MSI2-205ENST00000577241 ANO9A1A5B4 782 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 I3L4J1 428 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 M0QZQ0 153 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 TGFB1I1O43294 461 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 RPL17P18621 184 aaKnown RBP17.02■□□□□ 0.32
MSI2-205ENST00000577241 IGFBP6P24592 240 aaPredicted RBP17.02■□□□□ 0.32
MSI2-205ENST00000577241 OR1D2P34982 312 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 HOXD13P35453 343 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 MRPL58Q14197 206 aaKnown RBP17.02■□□□□ 0.32
MSI2-205ENST00000577241 UVSSAQ2YD98 709 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 VARS2Q5ST30 1063 aaKnown RBP17.02■□□□□ 0.32
MSI2-205ENST00000577241 LIN9Q5TKA1 542 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 C9orf57Q5W0N0 161 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 SLC8B1Q6J4K2 584 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 ZNF280DQ6N043 979 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 TMC5Q6UXY8 1006 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 DSTYKQ6XUX3 929 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 GLYCTKQ8IVS8 523 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 NELFCDQ8IXH7 590 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 C12orf56Q8IXR9 622 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 HSPBP1Q9NZL4 362 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 HOOK1Q9UJC3 728 aaKnown RBP17.02■□□□□ 0.32
MSI2-205ENST00000577241 NR2E1Q9Y466 385 aa17.02■□□□□ 0.32
MSI2-205ENST00000577241 TCF20Q9UGU0 1960 aaKnown RBP17.01■□□□□ 0.31
MSI2-205ENST00000577241 GOLGA8IPA6NC78 632 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 GOLGA8JA6NMD2 632 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 PIRO00625 290 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 RHOBTB3O94955 611 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 PAPLNO95428 1278 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 PNPLA4P41247 253 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 LILRA4P59901 499 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 YWHAHQ04917 246 aaPredicted RBP17.01■□□□□ 0.31
MSI2-205ENST00000577241 FAM160A1Q05DH4 1040 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 DPYDQ12882 1025 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 STK4Q13043 487 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 KCNB1Q14721 858 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 USP37Q86T82 979 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 FMR1NBQ8N0W7 255 aaPredicted RBP17.01■□□□□ 0.31
MSI2-205ENST00000577241 C12orf76Q8N812 135 aaPredicted RBP17.01■□□□□ 0.31
MSI2-205ENST00000577241 XXYLT1Q8NBI6 393 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 NOC3LQ8WTT2 800 aaKnown RBP17.01■□□□□ 0.31
MSI2-205ENST00000577241 FBXW11Q9UKB1 542 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 MAFFQ9ULX9 164 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 R3HCC1Q9Y3T6 440 aaKnown RBP17.01■□□□□ 0.31
MSI2-205ENST00000577241 CDY1Q9Y6F8 540 aa17.01■□□□□ 0.31
MSI2-205ENST00000577241 NCOR1O75376 2440 aa17■□□□□ 0.31
MSI2-205ENST00000577241 CCDC195A0A1B0GUA6 201 aa17■□□□□ 0.31
MSI2-205ENST00000577241 LOC730098B7Z3J9 87 aa17■□□□□ 0.31
MSI2-205ENST00000577241 PRPF40AO75400 957 aaKnown RBP17■□□□□ 0.31
MSI2-205ENST00000577241 ZMYND10O75800 440 aa17■□□□□ 0.31
MSI2-205ENST00000577241 HNRNPA1P09651 372 aaKnown RBP eCLIP17■□□□□ 0.31
MSI2-205ENST00000577241 ATXN8OSP0DMR3 200 aa17■□□□□ 0.31
MSI2-205ENST00000577241 ODC1P11926 461 aa17■□□□□ 0.31
MSI2-205ENST00000577241 TYMPP19971 482 aa17■□□□□ 0.31
MSI2-205ENST00000577241 HOXA9P31269 272 aa17■□□□□ 0.31
MSI2-205ENST00000577241 TAF6P49848 677 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms