RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 PTGDRQ13258 359 aa12.91□□□□□ -0.34
CDH8-202ENST00000577228 MRPL58Q14197 206 aaKnown RBP12.91□□□□□ -0.34
CDH8-202ENST00000577228 RSPO4Q2I0M5 234 aaPredicted RBP12.91□□□□□ -0.34
CDH8-202ENST00000577228 CYP4A22Q5TCH4 519 aa12.91□□□□□ -0.34
CDH8-202ENST00000577228 KRT79Q5XKE5 535 aa12.91□□□□□ -0.34
CDH8-202ENST00000577228 IQCEQ6IPM2 695 aa12.91□□□□□ -0.34
CDH8-202ENST00000577228 TSSK4Q6SA08 328 aa12.91□□□□□ -0.34
CDH8-202ENST00000577228 APPL2Q8NEU8 664 aa12.91□□□□□ -0.34
CDH8-202ENST00000577228 SUSD3Q96L08 255 aa12.91□□□□□ -0.34
CDH8-202ENST00000577228 ASB16Q96NS5 453 aa12.91□□□□□ -0.34
CDH8-202ENST00000577228 TRMT61BQ9BVS5 477 aaKnown RBP12.91□□□□□ -0.34
CDH8-202ENST00000577228 EPC1Q9H2F5 836 aa12.91□□□□□ -0.34
CDH8-202ENST00000577228 C17orf75Q9HAS0 396 aa12.91□□□□□ -0.34
CDH8-202ENST00000577228 ANKFY1Q9P2R3 1169 aa12.91□□□□□ -0.34
CDH8-202ENST00000577228 AFF4Q9UHB7 1163 aaKnown RBP12.91□□□□□ -0.34
CDH8-202ENST00000577228 NDRG2Q9UN36 371 aaKnown RBP12.91□□□□□ -0.34
CDH8-202ENST00000577228 WDR87Q6ZQQ6 2873 aa12.91□□□□□ -0.34
CDH8-202ENST00000577228 SHISA7A6NL88 538 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 SLC16A4O15374 487 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 LILRB5O75023 590 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 CPB1P15086 417 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 CCR2P41597 374 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 TWF1Q12792 350 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 STRN3Q13033 797 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 MTAPQ13126 283 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 FZD5Q13467 585 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 NOLC1Q14978 699 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDH8-202ENST00000577228 RINT1Q6NUQ1 792 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 C1orf186Q6ZWK4 172 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 HS6ST3Q8IZP7 471 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 GPR161Q8N6U8 529 aaKnown RBP12.9□□□□□ -0.34
CDH8-202ENST00000577228 LEMD2Q8NC56 503 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 DDX12PQ92771 950 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 NELL1Q92832 810 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 SMARCD2Q92925 531 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 IRF7Q92985 503 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 ZBTB45Q96K62 511 aaPredicted RBP12.9□□□□□ -0.34
CDH8-202ENST00000577228 ZNF512Q96ME7 567 aaPredicted RBP12.9□□□□□ -0.34
CDH8-202ENST00000577228 TBC1D32Q96NH3 1257 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 TIPINQ9BVW5 301 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 FAM126AQ9BYI3 521 aaPredicted RBP12.9□□□□□ -0.34
CDH8-202ENST00000577228 CHRDQ9H2X0 955 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 MAFFQ9ULX9 164 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 PCDHB8Q9UN66 801 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 PCDHB6Q9Y5E3 794 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 NCOR2Q9Y618 2525 aa12.9□□□□□ -0.34
CDH8-202ENST00000577228 SFI1A8K8P3 1242 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 LAD1O00515 517 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 NRG2O14511 850 aaPredicted RBP12.89□□□□□ -0.35
CDH8-202ENST00000577228 MEFVO15553 781 aaPredicted RBP12.89□□□□□ -0.35
CDH8-202ENST00000577228 TOM1L1O75674 476 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 MYL4P12829 197 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 PSMC3P17980 439 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 GUCY2CP25092 1073 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 U2AF2P26368 475 aaKnown RBP eCLIP12.89□□□□□ -0.35
CDH8-202ENST00000577228 MARCKSP29966 332 aaPredicted RBP12.89□□□□□ -0.35
CDH8-202ENST00000577228 CDC25AP30304 524 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 GDI1P31150 447 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 TOB1P50616 345 aaPredicted RBP12.89□□□□□ -0.35
CDH8-202ENST00000577228 SLC10A6Q3KNW5 377 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 SEZ6Q53EL9 994 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 VITQ6UXI7 678 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 MAP4K3Q8IVH8 894 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 DEPDC1BQ8WUY9 529 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
CDH8-202ENST00000577228 ZSWIM3Q96MP5 696 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 IER2Q9BTL4 223 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 ASAH2Q9NR71 780 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 CEP72Q9P209 647 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 TUBGCP4Q9UGJ1 667 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 CITO14578 2027 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 F5P12259 2224 aa12.89□□□□□ -0.35
CDH8-202ENST00000577228 DMXL1Q9Y485 3027 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 MOSPD3O75425 235 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 PLS3P13797 630 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 GJA1P17302 382 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 SDHBP21912 280 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 PRPHP41219 470 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 VIPR2P41587 438 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 SMTNP53814 917 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 EPHA5P54756 1037 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 LMNB2Q03252 620 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 RAD51AP2Q09MP3 1159 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 ZRSR1Q15695 479 aaKnown RBP12.88□□□□□ -0.35
CDH8-202ENST00000577228 IL17AQ16552 155 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 ZPBP2Q6X784 338 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 DTHD1Q6ZMT9 781 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 RNF19BQ6ZMZ0 732 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 TMEM161BQ8NDZ6 487 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 ZSCAN18Q8TBC5 510 aaPredicted RBP12.88□□□□□ -0.35
CDH8-202ENST00000577228 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 FAM3CQ92520 227 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 NTPCRQ9BSD7 190 aaKnown RBP12.88□□□□□ -0.35
CDH8-202ENST00000577228 MMTAG2Q9BU76 263 aaKnown RBP12.88□□□□□ -0.35
CDH8-202ENST00000577228 SLITRK6Q9H5Y7 841 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 ZNF334Q9HCZ1 680 aaPredicted RBP12.88□□□□□ -0.35
CDH8-202ENST00000577228 TRPV5Q9NQA5 729 aa12.88□□□□□ -0.35
CDH8-202ENST00000577228 SH2B1Q9NRF2 756 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms