RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 SUSD3Q96L08 255 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 RIPOR3Q96MK2 946 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 NECTIN4Q96NY8 510 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 CLSTN3Q9BQT9 956 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 PLEKHA4Q9H4M7 779 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 BACE2Q9Y5Z0 518 aa25.48■■□□□ 1.67
SNF8-217ENST00000576353 TGM5O43548 720 aa25.47■■□□□ 1.67
SNF8-217ENST00000576353 SSTR3P32745 418 aaPredicted RBP25.47■■□□□ 1.67
SNF8-217ENST00000576353 BMT2Q1RMZ1 405 aa25.47■■□□□ 1.67
SNF8-217ENST00000576353 KMT5BQ4FZB7 885 aa25.47■■□□□ 1.67
SNF8-217ENST00000576353 ATAT1Q5SQI0 421 aa25.47■■□□□ 1.67
SNF8-217ENST00000576353 BRSK2Q8IWQ3 736 aa25.47■■□□□ 1.67
SNF8-217ENST00000576353 NELFCDQ8IXH7 590 aa25.47■■□□□ 1.67
SNF8-217ENST00000576353 APPL2Q8NEU8 664 aa25.47■■□□□ 1.67
SNF8-217ENST00000576353 NOC3LQ8WTT2 800 aaKnown RBP25.47■■□□□ 1.67
SNF8-217ENST00000576353 PHF7Q9BWX1 381 aaPredicted RBP25.47■■□□□ 1.67
SNF8-217ENST00000576353 KIAA1586Q9HCI6 787 aa25.47■■□□□ 1.67
SNF8-217ENST00000576353 MAN1C1Q9NR34 630 aa25.47■■□□□ 1.67
SNF8-217ENST00000576353 RBAKQ9NYW8 714 aaPredicted RBP25.47■■□□□ 1.67
SNF8-217ENST00000576353 CGNQ9P2M7 1197 aaKnown RBP25.47■■□□□ 1.67
SNF8-217ENST00000576353 MTRRQ9UBK8 725 aa25.47■■□□□ 1.67
SNF8-217ENST00000576353 TRIP11Q15643 1979 aa25.47■■□□□ 1.67
SNF8-217ENST00000576353 GOLGA8IPA6NC78 632 aa25.46■■□□□ 1.67
SNF8-217ENST00000576353 GOLGA8JA6NMD2 632 aa25.46■■□□□ 1.67
SNF8-217ENST00000576353 H7C4K7 107 aa25.46■■□□□ 1.67
SNF8-217ENST00000576353 RPN1P04843 607 aaKnown RBP25.46■■□□□ 1.67
SNF8-217ENST00000576353 MTHFRP42898 656 aa25.46■■□□□ 1.67
SNF8-217ENST00000576353 GUCY2FP51841 1108 aa25.46■■□□□ 1.67
SNF8-217ENST00000576353 LILRA6Q6PI73 481 aa25.46■■□□□ 1.67
SNF8-217ENST00000576353 AGPAT3Q9NRZ7 376 aa25.46■■□□□ 1.67
SNF8-217ENST00000576353 C19orf67A6NJJ6 358 aa25.45■■□□□ 1.66
SNF8-217ENST00000576353 TULP1O00294 542 aaPredicted RBP25.45■■□□□ 1.66
SNF8-217ENST00000576353 TGFB1I1O43294 461 aa25.45■■□□□ 1.66
SNF8-217ENST00000576353 STK4Q13043 487 aa25.45■■□□□ 1.66
SNF8-217ENST00000576353 KNOP1Q1ED39 458 aaKnown RBP25.45■■□□□ 1.66
SNF8-217ENST00000576353 VARS2Q5ST30 1063 aaKnown RBP25.45■■□□□ 1.66
SNF8-217ENST00000576353 C9orf57Q5W0N0 161 aa25.45■■□□□ 1.66
SNF8-217ENST00000576353 TMC5Q6UXY8 1006 aa25.45■■□□□ 1.66
SNF8-217ENST00000576353 ZSWIM2Q8NEG5 633 aa25.45■■□□□ 1.66
SNF8-217ENST00000576353 CMASQ8NFW8 434 aaPredicted RBP25.45■■□□□ 1.66
SNF8-217ENST00000576353 CACTINQ8WUQ7 758 aaKnown RBP25.45■■□□□ 1.66
SNF8-217ENST00000576353 DPP3Q9NY33 737 aa25.45■■□□□ 1.66
SNF8-217ENST00000576353 HSPBP1Q9NZL4 362 aa25.45■■□□□ 1.66
SNF8-217ENST00000576353 PCDHB8Q9UN66 801 aa25.45■■□□□ 1.66
SNF8-217ENST00000576353 TCHHQ07283 1943 aa25.45■■□□□ 1.66
SNF8-217ENST00000576353 ZNF233A6NK53 670 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 SPATA31D3P0C874 917 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 OR1D2P34982 312 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 AARSP49588 968 aaKnown RBP eCLIP25.44■■□□□ 1.66
SNF8-217ENST00000576353 DPYDQ12882 1025 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 RAB33AQ14088 237 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 CYP26C1Q6V0L0 522 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 C15orf39Q6ZRI6 1047 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 SPATA31D4Q6ZUB0 917 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 GPR149Q86SP6 731 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 KREMEN2Q8NCW0 462 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 GOLGA5Q8TBA6 731 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 CD320Q9NPF0 282 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 CHMP5Q9NZZ3 219 aa25.44■■□□□ 1.66
SNF8-217ENST00000576353 ANO9A1A5B4 782 aa25.43■■□□□ 1.66
SNF8-217ENST00000576353 M0QZQ0 153 aa25.43■■□□□ 1.66
SNF8-217ENST00000576353 PIRO00625 290 aa25.43■■□□□ 1.66
SNF8-217ENST00000576353 LILRA4P59901 499 aa25.43■■□□□ 1.66
SNF8-217ENST00000576353 SURF1Q15526 300 aa25.43■■□□□ 1.66
SNF8-217ENST00000576353 DSTYKQ6XUX3 929 aa25.43■■□□□ 1.66
SNF8-217ENST00000576353 EFCAB13Q8IY85 973 aa25.43■■□□□ 1.66
SNF8-217ENST00000576353 FMR1NBQ8N0W7 255 aaPredicted RBP25.43■■□□□ 1.66
SNF8-217ENST00000576353 TMEM130Q8N3G9 435 aa25.43■■□□□ 1.66
SNF8-217ENST00000576353 CDY1Q9Y6F8 540 aa25.43■■□□□ 1.66
SNF8-217ENST00000576353 NCOR1O75376 2440 aa25.43■■□□□ 1.66
SNF8-217ENST00000576353 CCDC195A0A1B0GUA6 201 aa25.42■■□□□ 1.66
SNF8-217ENST00000576353 ADAM12O43184 909 aa25.42■■□□□ 1.66
SNF8-217ENST00000576353 KIF20AO95235 890 aa25.42■■□□□ 1.66
SNF8-217ENST00000576353 PRR29P0C7W0 189 aa25.42■■□□□ 1.66
SNF8-217ENST00000576353 TFAMQ00059 246 aaKnown RBP25.42■■□□□ 1.66
SNF8-217ENST00000576353 FAM160A1Q05DH4 1040 aa25.42■■□□□ 1.66
SNF8-217ENST00000576353 MRPL58Q14197 206 aaKnown RBP25.42■■□□□ 1.66
SNF8-217ENST00000576353 SLC8B1Q6J4K2 584 aa25.42■■□□□ 1.66
SNF8-217ENST00000576353 KIAA0895Q8NCT3 520 aa25.42■■□□□ 1.66
SNF8-217ENST00000576353 ZDHHC7Q9NXF8 308 aa25.42■■□□□ 1.66
SNF8-217ENST00000576353 FBXW11Q9UKB1 542 aa25.42■■□□□ 1.66
SNF8-217ENST00000576353 ARHGEF37A1IGU5 675 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 PPEF2O14830 753 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 CLIC2O15247 247 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 RHOBTB3O94955 611 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 WEE2P0C1S8 567 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 CTXN3Q4LDR2 81 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 LIN9Q5TKA1 542 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 ZNF280DQ6N043 979 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 RSPO2Q6UXX9 243 aaPredicted RBP25.41■■□□□ 1.66
SNF8-217ENST00000576353 CBWD2Q8IUF1 395 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 C12orf56Q8IXR9 622 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 XXYLT1Q8NBI6 393 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 RPGRIP1Q96KN7 1286 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 RHOBTB2Q9BYZ6 727 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 PDE11AQ9HCR9 933 aa25.41■■□□□ 1.66
SNF8-217ENST00000576353 LOC730098B7Z3J9 87 aa25.4■■□□□ 1.66
SNF8-217ENST00000576353 TBC1D4O60343 1298 aa25.4■■□□□ 1.66
SNF8-217ENST00000576353 ZMYND10O75800 440 aa25.4■■□□□ 1.66
SNF8-217ENST00000576353 CYP2J2P51589 502 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms