RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PCDHB2Q9Y5E7 798 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 LOC100653049A0A140TA62 436 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 KRT34O76011 436 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 TAP1Q03518 808 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 SLC34A1Q06495 639 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 MIS18BP1Q6P0N0 1132 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 FBXO33Q7Z6M2 555 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 LARGE2Q8N3Y3 721 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 MAGEC3Q8TD91 643 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 CMTM5Q96DZ9 223 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 PNMA5Q96PV4 448 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 ZNF277Q9NRM2 450 aaPredicted RBP13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 TBC1D22BQ9NU19 505 aa13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 ZC3H7BQ9UGR2 993 aaKnown RBP13.81□□□□□ -0.2
PCDHGB3-201ENST00000576222 TNS3Q68CZ2 1445 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 MED24O75448 989 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 PYGBP11216 843 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 CCDC92Q53HC0 331 aaPredicted RBP13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 ZNF667Q5HYK9 610 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 AGR3Q8TD06 166 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 CORO1CQ9ULV4 474 aaPredicted RBP13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 GTPBP10A4D1E9 387 aaKnown RBP13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 ZBBXA8MT70 800 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 PPEF1O14829 653 aaPredicted RBP13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 CBX6O95503 412 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 GZMAP12544 262 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 CDH6P55285 790 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 MORF4L2Q15014 288 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 SNRNP35Q16560 246 aaKnown RBP13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 ACCSLQ4AC99 568 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 POTEAQ6S8J7 498 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 TRIM15Q9C019 465 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 BLOC1S4Q9NUP1 217 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 CHCHD3Q9NX63 227 aaKnown RBP13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 CYP39A1Q9NYL5 469 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 BAG5Q9UL15 447 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 H0YIN7 160 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 PPIP5K2O43314 1243 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 SUPT3HO75486 399 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 SGPL1O95470 568 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 SRGAP2BP0DMP2 458 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 MYL2P10916 166 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 OSBPP22059 807 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 GIT2Q14161 759 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 ACAD10Q6JQN1 1059 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 C11orf63Q6NUN7 778 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 ADGRA1Q86SQ6 560 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 C7orf31Q8N865 590 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 C1orf131Q8NDD1 294 aaKnown RBP13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 CDHR1Q96JP9 859 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 COA1Q9GZY4 146 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 PCMTD2Q9NV79 361 aa13.8□□□□□ -0.2
PCDHGB3-201ENST00000576222 JCADQ9P266 1359 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 UNC5CO95185 931 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 THEMIS2Q5TEJ8 643 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 CCNYL1Q8N7R7 359 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 CKAP2Q8WWK9 683 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 SCG3Q8WXD2 468 aaKnown RBP13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 CCDC134Q9H6E4 229 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 DBNDD1Q9H9R9 158 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 KCND2Q9NZV8 630 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 C2CD2Q9Y426 696 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 FLT1P17948 1338 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 AHCYL1O43865 530 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 SPAG6O75602 509 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 CASP2P42575 452 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 IL1RL1Q01638 556 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 AUHQ13825 339 aaKnown RBP13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 CHI3L2Q15782 390 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 FAM160B1Q5W0V3 765 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 GALNT4Q8N4A0 578 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 SCFD2Q8WU76 684 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 EME1Q96AY2 570 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 RAB6BQ9NRW1 208 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 CLRN2A0PK11 232 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 NFX1Q12986 1120 aaKnown RBP13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 SF3B3Q15393 1217 aaKnown RBP13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 C1orf228Q6PIY5 440 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 RAB44Q7Z6P3 723 aaPredicted RBP13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 SH2D3AQ9BRG2 576 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 OSBPL7Q9BZF2 842 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 ING2Q9H160 280 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 ADAMTS13Q76LX8 1427 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 DNM1LO00429 736 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 SERPINB2P05120 415 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 NUDT17P0C025 328 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 PCYT1AP49585 367 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 MTFR1Q15390 333 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 SLC44A4Q53GD3 710 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 LACTB2Q53H82 288 aaPredicted RBP13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 SLC20A1Q8WUM9 679 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 INPP5DQ92835 1189 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 PAGR1Q9BTK6 254 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 MED10Q9BTT4 135 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 RUSC1Q9BVN2 902 aa13.79□□□□□ -0.2
PCDHGB3-201ENST00000576222 ZNF263O14978 683 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 APRTP07741 180 aa13.78□□□□□ -0.2
PCDHGB3-201ENST00000576222 TFDP1Q14186 410 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms