RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 KREMEN2Q8NCW0 462 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 GLIS3Q8NEA6 775 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 SUSD6Q92537 303 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 CBWD1Q9BRT8 395 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 PLEKHA4Q9H4M7 779 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 CDY1Q9Y6F8 540 aa16.54■□□□□ 0.24
SMG6-220ENST00000576218 CCDC195A0A1B0GUA6 201 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 KIAA0391O15091 583 aaKnown RBP16.53■□□□□ 0.24
SMG6-220ENST00000576218 EXTL3O43909 919 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 MYL1P05976 194 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 IGFBP6P24592 240 aaPredicted RBP16.53■□□□□ 0.24
SMG6-220ENST00000576218 LRPAP1P30533 357 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 TFAMQ00059 246 aaKnown RBP16.53■□□□□ 0.24
SMG6-220ENST00000576218 CTXN3Q4LDR2 81 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 VARS2Q5ST30 1063 aaKnown RBP16.53■□□□□ 0.24
SMG6-220ENST00000576218 SPATA1Q5VX52 437 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 ZNF280DQ6N043 979 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 CCDC149Q6ZUS6 474 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 GPD1LQ8N335 351 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 HDAC7Q8WUI4 952 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 CACTINQ8WUQ7 758 aaKnown RBP16.53■□□□□ 0.24
SMG6-220ENST00000576218 SUSD3Q96L08 255 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 MTRRQ9UBK8 725 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 CDH22Q9UJ99 828 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 HPSEQ9Y251 543 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 C2CD2Q9Y426 696 aa16.53■□□□□ 0.24
SMG6-220ENST00000576218 ARHGEF37A1IGU5 675 aa16.52■□□□□ 0.24
SMG6-220ENST00000576218 ELF1P32519 619 aa16.52■□□□□ 0.24
SMG6-220ENST00000576218 POU5F1Q01860 360 aaKnown RBP16.52■□□□□ 0.24
SMG6-220ENST00000576218 PPM1LQ5SGD2 360 aa16.52■□□□□ 0.24
SMG6-220ENST00000576218 GPR149Q86SP6 731 aa16.52■□□□□ 0.24
SMG6-220ENST00000576218 BRSK2Q8IWQ3 736 aa16.52■□□□□ 0.24
SMG6-220ENST00000576218 TDRD5Q8NAT2 981 aaKnown RBP16.52■□□□□ 0.24
SMG6-220ENST00000576218 SMG7Q92540 1137 aaKnown RBP16.52■□□□□ 0.24
SMG6-220ENST00000576218 CLSTN3Q9BQT9 956 aa16.52■□□□□ 0.24
SMG6-220ENST00000576218 POMKQ9H5K3 350 aa16.52■□□□□ 0.24
SMG6-220ENST00000576218 CD320Q9NPF0 282 aa16.52■□□□□ 0.24
SMG6-220ENST00000576218 DPP3Q9NY33 737 aa16.52■□□□□ 0.24
SMG6-220ENST00000576218 PCDHB8Q9UN66 801 aa16.52■□□□□ 0.24
SMG6-220ENST00000576218 POLIQ9UNA4 740 aa16.52■□□□□ 0.24
SMG6-220ENST00000576218 BACE2Q9Y5Z0 518 aa16.52■□□□□ 0.24
SMG6-220ENST00000576218 PDCD11Q14690 1871 aaKnown RBP16.52■□□□□ 0.23
SMG6-220ENST00000576218 BDP1A6H8Y1 2624 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 ZNF233A6NK53 670 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 RFPL2O75678 378 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 C1RP00736 705 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 TMEM191BP0C7N4 346 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 ODC1P11926 461 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 ALADP13716 330 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 CPB1P15086 417 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 CYP2J2P51589 502 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 YWHAHQ04917 246 aaPredicted RBP16.51■□□□□ 0.23
SMG6-220ENST00000576218 ZBTB6Q15916 424 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 KMT5BQ4FZB7 885 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 C9orf57Q5W0N0 161 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 CD300LGQ6UXG3 332 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 KRBA2Q6ZNG9 492 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 C15orf39Q6ZRI6 1047 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 NT5DC4Q86YG4 428 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 TMEM130Q8N3G9 435 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 ZNF507Q8TCN5 953 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 ZNF560Q96MR9 790 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 GOLPH3LQ9H4A5 285 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 KIAA1586Q9HCI6 787 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 ZDHHC7Q9NXF8 308 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 HSPBP1Q9NZL4 362 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 FBXW11Q9UKB1 542 aa16.51■□□□□ 0.23
SMG6-220ENST00000576218 PLXNA3P51805 1871 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 C19orf67A6NJJ6 358 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 PRRG1O14668 218 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 CLIC2O15247 247 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 ADAM12O43184 909 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 XYLBO75191 536 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 CLSTN1O94985 981 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 ZNF202O95125 648 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 KIF20AO95235 890 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 RPN1P04843 607 aaKnown RBP16.5■□□□□ 0.23
SMG6-220ENST00000576218 C8AP07357 584 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 ADRB2P07550 413 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 KRT19P08727 400 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 PAX3P23760 479 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 TAF6P49848 677 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 PSMD2Q13200 908 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 RAB33AQ14088 237 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 CRELD2Q6UXH1 353 aaPredicted RBP16.5■□□□□ 0.23
SMG6-220ENST00000576218 EPM2AIP1Q7L775 607 aaPredicted RBP16.5■□□□□ 0.23
SMG6-220ENST00000576218 METTL23Q86XA0 190 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 RNF135Q8IUD6 432 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 CMASQ8NFW8 434 aaPredicted RBP16.5■□□□□ 0.23
SMG6-220ENST00000576218 GOLGA5Q8TBA6 731 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 SLC7A14Q8TBB6 771 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 SCFD1Q8WVM8 642 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 ACSF2Q96CM8 615 aaPredicted RBP16.5■□□□□ 0.23
SMG6-220ENST00000576218 ANKRD36BP1Q96IX9 119 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 AGPAT3Q9NRZ7 376 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 TIMM13Q9Y5L4 95 aaPredicted RBP16.5■□□□□ 0.23
SMG6-220ENST00000576218 TCHHQ07283 1943 aa16.5■□□□□ 0.23
SMG6-220ENST00000576218 LOC730098B7Z3J9 87 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 PPEF2O14830 753 aa16.49■□□□□ 0.23
SMG6-220ENST00000576218 DCXO43602 365 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms