RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 BIRC3Q13489 604 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 GRIN2CQ14957 1233 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 FUT10Q6P4F1 479 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 DDX53Q86TM3 631 aaKnown RBP15.09■□□□□ 0.01
RPAIN-217ENST00000575711 CREBRFQ8IUR6 639 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 C3orf58Q8NDZ4 430 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 SPPL3Q8TCT6 385 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 POF1BQ8WVV4 589 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 ZNF516Q92618 1163 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 CNOT6LQ96LI5 555 aaKnown RBP15.09■□□□□ 0.01
RPAIN-217ENST00000575711 ZNF560Q96MR9 790 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 BPIFA3Q9BQP9 254 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 LMAN2LQ9H0V9 348 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 PRDM12Q9H4Q4 367 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 MMRN2Q9H8L6 949 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 MAGEC2Q9UBF1 373 aaPredicted RBP15.09■□□□□ 0.01
RPAIN-217ENST00000575711 AGAP1Q9UPQ3 857 aa15.09■□□□□ 0.01
RPAIN-217ENST00000575711 SF3B1O75533 1304 aaKnown RBP eCLIP15.09■□□□□ 0.01
RPAIN-217ENST00000575711 ANK1P16157 1881 aa15.08■□□□□ 0.01
RPAIN-217ENST00000575711 PDCD11Q14690 1871 aaKnown RBP15.08■□□□□ 0.01
RPAIN-217ENST00000575711 NLRC5Q86WI3 1866 aa15.08■□□□□ 0.01
RPAIN-217ENST00000575711 RFXAPO00287 272 aa15.08■□□□□ 0
RPAIN-217ENST00000575711 GRM6O15303 877 aa15.08■□□□□ 0
RPAIN-217ENST00000575711 PAX3P23760 479 aa15.08■□□□□ 0
RPAIN-217ENST00000575711 TAF6P49848 677 aa15.08■□□□□ 0
RPAIN-217ENST00000575711 ZNF165P49910 485 aa15.08■□□□□ 0
RPAIN-217ENST00000575711 MCCD1P59942 119 aaPredicted RBP15.08■□□□□ 0
RPAIN-217ENST00000575711 TRPC3Q13507 836 aa15.08■□□□□ 0
RPAIN-217ENST00000575711 BMS1Q14692 1282 aaKnown RBP15.08■□□□□ 0
RPAIN-217ENST00000575711 PTPROQ16827 1216 aa15.08■□□□□ 0
RPAIN-217ENST00000575711 C1orf220Q5T0J3 134 aa15.08■□□□□ 0
RPAIN-217ENST00000575711 VPS52Q8N1B4 723 aa15.08■□□□□ 0
RPAIN-217ENST00000575711 LRRC52Q8N7C0 313 aa15.08■□□□□ 0
RPAIN-217ENST00000575711 TLR9Q9NR96 1032 aa15.08■□□□□ 0
RPAIN-217ENST00000575711 SIX4Q9UIU6 781 aa15.08■□□□□ 0
RPAIN-217ENST00000575711 TRIP11Q15643 1979 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 PPEF2O14830 753 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 CAVIN2O95810 425 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 C4BPAP04003 597 aaKnown RBP15.07■□□□□ 0
RPAIN-217ENST00000575711 SOD2P04179 222 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 BRCC3P46736 316 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 GCLMP48507 274 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 LILRA4P59901 499 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 PPP3CAQ08209 521 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 MYO1EQ12965 1108 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 ZACNQ401N2 412 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 SV2CQ496J9 727 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 TDRD10Q5VZ19 366 aaKnown RBP15.07■□□□□ 0
RPAIN-217ENST00000575711 KRT39Q6A163 491 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 CD300LGQ6UXG3 332 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 SV2AQ7L0J3 742 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 Q7L0L9 218 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 TRIM59Q8IWR1 403 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 DEFB123Q8N688 67 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 AOPEPQ8N6M6 819 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 CXorf38Q8TB03 319 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 SLC35C1Q96A29 364 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 GAS2L1Q99501 681 aaPredicted RBP15.07■□□□□ 0
RPAIN-217ENST00000575711 HERC2P3Q9BVR0 1158 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 GPR62Q9BZJ7 368 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 TMEM8AQ9HCN3 771 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 ENTPD7Q9NQZ7 604 aa15.07■□□□□ 0
RPAIN-217ENST00000575711 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.07■□□□□ 0
RPAIN-217ENST00000575711 ARHGEF37A1IGU5 675 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 SMTNL1A8MU46 457 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 LPXNO60711 386 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 CLSTN1O94985 981 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 CSPG5O95196 566 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 EFEMP2O95967 443 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 IGFBP6P24592 240 aaPredicted RBP15.06■□□□□ 0
RPAIN-217ENST00000575711 DNAJB1P25685 340 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 PIK3CAP42336 1068 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 MTIF2P46199 727 aaKnown RBP15.06■□□□□ 0
RPAIN-217ENST00000575711 AARSP49588 968 aaKnown RBP eCLIP15.06■□□□□ 0
RPAIN-217ENST00000575711 MXI1P50539 228 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 NCOA4Q13772 614 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 USP41Q3LFD5 358 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 TIGD5Q53EQ6 642 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 HSP90AA4PQ58FG1 418 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 FAM171A1Q5VUB5 890 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 PDE12Q6L8Q7 609 aaKnown RBP15.06■□□□□ 0
RPAIN-217ENST00000575711 KIAA1841Q6NSI8 718 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 DSTYKQ6XUX3 929 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 C15orf39Q6ZRI6 1047 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 TMC7Q7Z402 723 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 IRF2BP1Q8IU81 584 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 RNF168Q8IYW5 571 aaPredicted RBP15.06■□□□□ 0
RPAIN-217ENST00000575711 MICAL1Q8TDZ2 1067 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 MRPL38Q96DV4 380 aaKnown RBP15.06■□□□□ 0
RPAIN-217ENST00000575711 SUSD3Q96L08 255 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 TCF25Q9BQ70 676 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 VN1R3Q9BXE9 311 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 ZBP1Q9H171 429 aa15.06■□□□□ 0
RPAIN-217ENST00000575711 SAMSN1Q9NSI8 373 aaKnown RBP15.06■□□□□ 0
RPAIN-217ENST00000575711 BECN2A8MW95 431 aa15.05■□□□□ -0
RPAIN-217ENST00000575711 KPNA7A9QM74 516 aa15.05■□□□□ -0
RPAIN-217ENST00000575711 KCNJ18B7U540 433 aa15.05■□□□□ -0
RPAIN-217ENST00000575711 I3L4J1 428 aa15.05■□□□□ -0
RPAIN-217ENST00000575711 SYN3O14994 580 aa15.05■□□□□ -0
RPAIN-217ENST00000575711 N4BP1O75113 896 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms