RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 KLRC4O43908 158 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 ZNF202O95125 648 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 MBD3O95983 291 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 GLUD1P00367 558 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 HOXB8P17481 243 aaPredicted RBP14.38□□□□□ -0.11
RPAIN-216ENST00000575599 GARTP22102 1010 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 HOXD13P35453 343 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 KMT5BQ4FZB7 885 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 RARS2Q5T160 578 aaKnown RBP14.38□□□□□ -0.11
RPAIN-216ENST00000575599 CRELD2Q6UXH1 353 aaPredicted RBP14.38□□□□□ -0.11
RPAIN-216ENST00000575599 KRBA2Q6ZNG9 492 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 PALB2Q86YC2 1186 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 BEST2Q8NFU1 509 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 SCFD1Q8WVM8 642 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 PIK3R5Q8WYR1 880 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 FBXL18Q96ME1 805 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 MAN1C1Q9NR34 630 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 CDH22Q9UJ99 828 aa14.38□□□□□ -0.11
RPAIN-216ENST00000575599 TNFRSF10AO00220 468 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 GADD45BO75293 160 aaPredicted RBP14.37□□□□□ -0.11
RPAIN-216ENST00000575599 LDHAP00338 332 aaKnown RBP14.37□□□□□ -0.11
RPAIN-216ENST00000575599 MYL1P05976 194 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 ADRB2P07550 413 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 WEE2P0C1S8 567 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 SPATA31D3P0C874 917 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 CYP3A5P20815 502 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 FGFR3P22607 806 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 LRPAP1P30533 357 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 SSTR3P32745 418 aaPredicted RBP14.37□□□□□ -0.11
RPAIN-216ENST00000575599 ZBTB6Q15916 424 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 KANK3Q6NY19 840 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 SPATA31D4Q6ZUB0 917 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 GPR65Q8IYL9 337 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 GPD1LQ8N335 351 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 LNX1Q8TBB1 728 aaPredicted RBP14.37□□□□□ -0.11
RPAIN-216ENST00000575599 ZNF507Q8TCN5 953 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 TSPAN18Q96SJ8 248 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 S1PR5Q9H228 398 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 ASB7Q9H672 318 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 SFXN1Q9H9B4 322 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 RBAKQ9NYW8 714 aaPredicted RBP14.37□□□□□ -0.11
RPAIN-216ENST00000575599 FNIP2Q9P278 1114 aa14.37□□□□□ -0.11
RPAIN-216ENST00000575599 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.37□□□□□ -0.11
RPAIN-216ENST00000575599 PPEF2O14830 753 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 TGM5O43548 720 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 EXTL3O43909 919 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 IL18RAPO95256 599 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 RPN1P04843 607 aaKnown RBP14.36□□□□□ -0.11
RPAIN-216ENST00000575599 WNT7BP56706 349 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 ZP2Q05996 745 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 CBX2Q14781 532 aaPredicted RBP14.36□□□□□ -0.11
RPAIN-216ENST00000575599 SPATA1Q5VX52 437 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 CES5AQ6NT32 575 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 PDXDC1Q6P996 788 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 TMC5Q6UXY8 1006 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 BRSK2Q8IWQ3 736 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 ADHFE1Q8IWW8 467 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 EFCAB13Q8IY85 973 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 AGPAT3Q9NRZ7 376 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 HSPBP1Q9NZL4 362 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 DERAQ9Y315 318 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 C2CD2Q9Y426 696 aa14.36□□□□□ -0.11
RPAIN-216ENST00000575599 MUC3AQ02505 3323 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 SYN3O14994 580 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 CLIC2O15247 247 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 ADAM12O43184 909 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 TGFB1I1O43294 461 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 CYP2J2P51589 502 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 TFAMQ00059 246 aaKnown RBP14.35□□□□□ -0.11
RPAIN-216ENST00000575599 POU5F1Q01860 360 aaKnown RBP14.35□□□□□ -0.11
RPAIN-216ENST00000575599 ITIH3Q06033 890 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 STK4Q13043 487 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 BMT2Q1RMZ1 405 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 VARS2Q5ST30 1063 aaKnown RBP14.35□□□□□ -0.11
RPAIN-216ENST00000575599 ELMSAN1Q6PJG2 1045 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 ANKS3Q6ZW76 656 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 HS2ST1Q7LGA3 356 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 GJD3Q8N144 294 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 KIAA0895Q8NCT3 520 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 FEZF2Q8TBJ5 459 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 SUSD6Q92537 303 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 CCDC47Q96A33 483 aaKnown RBP14.35□□□□□ -0.11
RPAIN-216ENST00000575599 CCDC34Q96HJ3 373 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 SUSD3Q96L08 255 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 CLSTN3Q9BQT9 956 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 ADAM7Q9H2U9 754 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 MTRRQ9UBK8 725 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 PRKAG3Q9UGI9 489 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 CDY1Q9Y6F8 540 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 C5orf42Q9H799 3197 aa14.35□□□□□ -0.11
RPAIN-216ENST00000575599 KIAA0391O15091 583 aaKnown RBP14.34□□□□□ -0.11
RPAIN-216ENST00000575599 SP100P23497 879 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-216ENST00000575599 OR1D2P34982 312 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 DPYDQ12882 1025 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 PSMD2Q13200 908 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 KNOP1Q1ED39 458 aaKnown RBP14.34□□□□□ -0.11
RPAIN-216ENST00000575599 C9orf57Q5W0N0 161 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 DSTYKQ6XUX3 929 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 CBWD2Q8IUF1 395 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 FMR1NBQ8N0W7 255 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms