RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 C4BPAP04003 597 aaKnown RBP18.43■□□□□ 0.54
NUP88-210ENST00000574867 RB1P06400 928 aa18.43■□□□□ 0.54
NUP88-210ENST00000574867 POLR2BP30876 1174 aaKnown RBP18.43■□□□□ 0.54
NUP88-210ENST00000574867 PBX3P40426 434 aa18.43■□□□□ 0.54
NUP88-210ENST00000574867 CXorf38Q8TB03 319 aa18.43■□□□□ 0.54
NUP88-210ENST00000574867 TMEM169Q96HH4 297 aa18.43■□□□□ 0.54
NUP88-210ENST00000574867 FAM84AQ96KN4 292 aa18.43■□□□□ 0.54
NUP88-210ENST00000574867 TUBGCP2Q9BSJ2 902 aa18.43■□□□□ 0.54
NUP88-210ENST00000574867 C17orf80Q9BSJ5 609 aa18.43■□□□□ 0.54
NUP88-210ENST00000574867 MMRN2Q9H8L6 949 aa18.43■□□□□ 0.54
NUP88-210ENST00000574867 CACNG4Q9UBN1 327 aa18.43■□□□□ 0.54
NUP88-210ENST00000574867 SIX4Q9UIU6 781 aa18.43■□□□□ 0.54
NUP88-210ENST00000574867 PMM2O15305 246 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 B3GAT3O94766 335 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 KIF4AO95239 1232 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 TPM2P07951 284 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 KRT19P08727 400 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 PRKCSHP14314 528 aaPredicted RBP18.42■□□□□ 0.54
NUP88-210ENST00000574867 CDK11BP21127 795 aaKnown RBP18.42■□□□□ 0.54
NUP88-210ENST00000574867 FMO5P49326 533 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 EPC2Q52LR7 807 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 IGSF21Q96ID5 467 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 C11orf84Q9BUA3 381 aaPredicted RBP18.42■□□□□ 0.54
NUP88-210ENST00000574867 MARCH5Q9NX47 278 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 ADAM28Q9UKQ2 775 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 AGAP1Q9UPQ3 857 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 P4HA2O15460 535 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 KCNH2Q12809 1159 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 TRPC3Q13507 836 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 NUB1Q9Y5A7 615 aa18.42■□□□□ 0.54
NUP88-210ENST00000574867 SF3B1O75533 1304 aaKnown RBP eCLIP18.41■□□□□ 0.549e-6■■■■■ 68.9
NUP88-210ENST00000574867 NT5C1B-RDH14C9J2C7 533 aa18.41■□□□□ 0.54
NUP88-210ENST00000574867 PIK3CAP42336 1068 aa18.41■□□□□ 0.54
NUP88-210ENST00000574867 TAF6P49848 677 aa18.41■□□□□ 0.54
NUP88-210ENST00000574867 MYL7Q01449 175 aa18.41■□□□□ 0.54
NUP88-210ENST00000574867 CETN1Q12798 172 aa18.41■□□□□ 0.54
NUP88-210ENST00000574867 MYO1EQ12965 1108 aa18.41■□□□□ 0.54
NUP88-210ENST00000574867 NCOA4Q13772 614 aa18.41■□□□□ 0.54
NUP88-210ENST00000574867 C3orf58Q8NDZ4 430 aa18.41■□□□□ 0.54
NUP88-210ENST00000574867 FBXL13Q8NEE6 735 aa18.41■□□□□ 0.54
NUP88-210ENST00000574867 LIMA1Q9UHB6 759 aaKnown RBP18.41■□□□□ 0.54
NUP88-210ENST00000574867 LAMA3Q16787 3333 aa18.41■□□□□ 0.54
NUP88-210ENST00000574867 TRAPPC3O43617 180 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 TADA2AO75478 443 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 FGF18O76093 207 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 ATICP31939 592 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 PLCB3Q01970 1234 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 KRT17Q04695 432 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 ELAVL2Q12926 359 aaKnown RBP18.4■□□□□ 0.54
NUP88-210ENST00000574867 KRT31Q15323 416 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 SV2CQ496J9 727 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 CBWD6Q4V339 395 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 CBWD3Q5JTY5 395 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 CBWD5Q5RIA9 395 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 TMEM173Q86WV6 379 aaPredicted RBP18.4■□□□□ 0.54
NUP88-210ENST00000574867 FBXO22Q8NEZ5 403 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 RABGGTAQ92696 567 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 IMPG2Q9BZV3 1241 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 MTUS1Q9ULD2 1270 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 PPEF2O14830 753 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 VNN1O95497 513 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 STAU1O95793 577 aaKnown RBP18.4■□□□□ 0.54
NUP88-210ENST00000574867 AARSP49588 968 aaKnown RBP eCLIP18.4■□□□□ 0.54
NUP88-210ENST00000574867 VWA3BQ502W6 1294 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 TMEM130Q8N3G9 435 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 KLHL23Q8NBE8 558 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 BCL7CQ8WUZ0 217 aaPredicted RBP18.4■□□□□ 0.54
NUP88-210ENST00000574867 TAF4BQ92750 862 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 NDST4Q9H3R1 872 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 LZTS1Q9Y250 596 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 COQ4Q9Y3A0 265 aa18.4■□□□□ 0.54
NUP88-210ENST00000574867 LAMA2P24043 3122 aaKnown RBP18.4■□□□□ 0.54
NUP88-210ENST00000574867 SCN1AP35498 2009 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 F8W810 466 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 HLA-DRAP01903 254 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 ITGB1P05556 798 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 LILRA4P59901 499 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 UBE3AQ05086 875 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 MIIPQ5JXC2 388 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 FUT10Q6P4F1 479 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 SPRED2Q7Z698 418 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 TAS1R2Q8TE23 839 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 HASPINQ8TF76 798 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 HPDLQ96IR7 371 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 TAB2Q9NYJ8 693 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 PLXNA4Q9HCM2 1894 aa18.39■□□□□ 0.53
NUP88-210ENST00000574867 ARHGEF37A1IGU5 675 aa18.38■□□□□ 0.53
NUP88-210ENST00000574867 ATP1A3P13637 1013 aa18.38■□□□□ 0.53
NUP88-210ENST00000574867 CD300LGQ6UXG3 332 aa18.38■□□□□ 0.53
NUP88-210ENST00000574867 DDX53Q86TM3 631 aaKnown RBP18.38■□□□□ 0.53
NUP88-210ENST00000574867 CCDC150Q8NCX0 1101 aa18.38■□□□□ 0.53
NUP88-210ENST00000574867 RNF214Q8ND24 703 aa18.38■□□□□ 0.53
NUP88-210ENST00000574867 ZNF576Q9H609 170 aa18.38■□□□□ 0.53
NUP88-210ENST00000574867 VRTNQ9H8Y1 702 aa18.38■□□□□ 0.53
NUP88-210ENST00000574867 COL4A4P53420 1690 aaPredicted RBP18.38■□□□□ 0.53
NUP88-210ENST00000574867 GTPBP10A4D1E9 387 aaKnown RBP18.38■□□□□ 0.53
NUP88-210ENST00000574867 LRRC10BA6NIK2 292 aa18.38■□□□□ 0.53
NUP88-210ENST00000574867 EFEMP2O95967 443 aa18.38■□□□□ 0.53
NUP88-210ENST00000574867 CST3P01034 146 aaPredicted RBP18.38■□□□□ 0.53
NUP88-210ENST00000574867 MYL6P60660 151 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms