RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 PROZP22891 400 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 RRM1P23921 792 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 PHKA2P46019 1235 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 TRPC3Q13507 836 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 SURF1Q15526 300 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 FAM153CQ494X1 144 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 SPRYD7Q5W111 196 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 LLGL2Q6P1M3 1020 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 NAP1L3Q99457 506 aaPredicted RBP11.18□□□□□ -0.62
USP43-205ENST00000574408 PARK7Q99497 189 aaKnown RBP11.18□□□□□ -0.62
USP43-205ENST00000574408 KATNBL1Q9H079 304 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 CDT1Q9H211 546 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 SLITRK6Q9H5Y7 841 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 PTPRHQ9HD43 1115 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 FAM153AQ9UHL3 310 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 LCMT1Q9UIC8 334 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 PLXNB2O15031 1838 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 PLXNA1Q9UIW2 1896 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 A0A087WZ62 844 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 GOLGA6L10A0A0M3HER8 536 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 HOXC6P09630 235 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 IQCF3P0C7M6 154 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 CD58P19256 250 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 GGCXP38435 758 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 AARSP49588 968 aaKnown RBP eCLIP11.18□□□□□ -0.62
USP43-205ENST00000574408 GTF2A1P52655 376 aaPredicted RBP11.18□□□□□ -0.62
USP43-205ENST00000574408 FKBP1BP68106 108 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 GRM1Q13255 1194 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 EFCAB13Q8IY85 973 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 TSEN2Q8NCE0 465 aaKnown RBP11.18□□□□□ -0.62
USP43-205ENST00000574408 CCDC26Q8TAB7 109 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 CAVIN3Q969G5 261 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 PTPN18Q99952 460 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 FDXACB1Q9BRP7 624 aaPredicted RBP11.18□□□□□ -0.62
USP43-205ENST00000574408 C11orf70Q9BRQ4 267 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 CELF4Q9BZC1 486 aaKnown RBP11.18□□□□□ -0.62
USP43-205ENST00000574408 TRIM7Q9C029 511 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 WNT8AQ9H1J5 351 aa11.18□□□□□ -0.62
USP43-205ENST00000574408 RBM47A0AV96 593 aaKnown RBP11.17□□□□□ -0.62
USP43-205ENST00000574408 TTI1O43156 1089 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 VTNP04004 478 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 CXCL8P10145 99 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 MAPK4P31152 587 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 SCARA5Q6ZMJ2 495 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 ZNF467Q7Z7K2 595 aaPredicted RBP11.17□□□□□ -0.62
USP43-205ENST00000574408 DDX42Q86XP3 938 aaKnown RBP eCLIP11.17□□□□□ -0.62
USP43-205ENST00000574408 TMEM192Q8IY95 271 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 IFT122Q9HBG6 1241 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 H0YHG0 523 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 H3BRB1 525 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 MAGEB2O15479 319 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 CYP1A1P04798 512 aaPredicted RBP11.17□□□□□ -0.62
USP43-205ENST00000574408 CENPCQ03188 943 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 GRB14Q14449 540 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 SEL1L2Q5TEA6 688 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 MAATS1Q7Z4T9 603 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 PLEKHH3Q7Z736 793 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 CD101Q93033 1021 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 MAML3Q96JK9 1138 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 SCLT1Q96NL6 688 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 NIF3L1Q9GZT8 377 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 TUT1Q9H6E5 874 aaKnown RBP11.17□□□□□ -0.62
USP43-205ENST00000574408 ERVK-5Q9HDB9 667 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 PRMT7Q9NVM4 692 aaPredicted RBP11.17□□□□□ -0.62
USP43-205ENST00000574408 TNFSF13BQ9Y275 285 aa11.17□□□□□ -0.62
USP43-205ENST00000574408 RNF40O75150 1001 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 PPFIA4O75335 1185 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 SYF2O95926 243 aaKnown RBP11.16□□□□□ -0.62
USP43-205ENST00000574408 TNNC2P02585 160 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 SMPD1P17405 629 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 PEX5P50542 639 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 ZNF699Q32M78 642 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 ZNF394Q53GI3 561 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 TRIM72Q6ZMU5 477 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 TRIM11Q96F44 468 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 C16orf70Q9BSU1 422 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 RPF1Q9H9Y2 349 aaKnown RBP11.16□□□□□ -0.62
USP43-205ENST00000574408 AVENQ9NQS1 362 aaPredicted RBP11.16□□□□□ -0.62
USP43-205ENST00000574408 GPR25O00155 361 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 MYBL1P10243 752 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 TMOD1P28289 359 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 NOMO3P69849 1222 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 PPFIA1Q13136 1202 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 NNTQ13423 1086 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 FAM110CQ1W6H9 321 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 SGSM1Q2NKQ1 1148 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 MICALL1Q8N3F8 863 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 EMID1Q96A84 441 aaPredicted RBP11.16□□□□□ -0.62
USP43-205ENST00000574408 ANKRD36BP1Q96IX9 119 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 TINF2Q9BSI4 451 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 RRAGCQ9HB90 399 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 ADAM22Q9P0K1 906 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 CNTN6Q9UQ52 1028 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 AGPSO00116 658 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 KRT19P08727 400 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 WEE2P0C1S8 567 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 PYGMP11217 842 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 CTNNA1P35221 906 aaKnown RBP11.16□□□□□ -0.62
USP43-205ENST00000574408 MON1BQ7L1V2 547 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 OR6J1Q8NGC5 347 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms