RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 ATP6V0A4Q9HBG4 840 aa5.89□□□□□ -1.47
TRIM25-208ENST00000574234 IL17RBQ9NRM6 502 aa5.89□□□□□ -1.47
TRIM25-208ENST00000574234 PAG1Q9NWQ8 432 aa5.89□□□□□ -1.47
TRIM25-208ENST00000574234 TCEAL9Q9UHQ7 104 aa5.89□□□□□ -1.47
TRIM25-208ENST00000574234 SOX13Q9UN79 622 aa5.89□□□□□ -1.47
TRIM25-208ENST00000574234 TRPV2Q9Y5S1 764 aa5.89□□□□□ -1.47
TRIM25-208ENST00000574234 SLC12A7Q9Y666 1083 aa5.89□□□□□ -1.47
TRIM25-208ENST00000574234 NUMBLQ9Y6R0 609 aa5.89□□□□□ -1.47
TRIM25-208ENST00000574234 ABCB11O95342 1321 aa5.89□□□□□ -1.47
TRIM25-208ENST00000574234 PLXNB3Q9ULL4 1909 aa5.89□□□□□ -1.47
TRIM25-208ENST00000574234 USP9XQ93008 2570 aaPredicted RBP5.89□□□□□ -1.47
TRIM25-208ENST00000574234 TDRD15B5MCY1 1934 aaKnown RBP5.88□□□□□ -1.47
TRIM25-208ENST00000574234 CFAP46Q8IYW2 2715 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 PTPRBP23467 1997 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 NOTCH4Q99466 2003 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 M0QZ92 97 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 GFRA2O00451 464 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 HTR3BO95264 441 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 SLC3A2P08195 630 aaKnown RBP5.88□□□□□ -1.47
TRIM25-208ENST00000574234 CT47B1P0C2W7 299 aaPredicted RBP5.88□□□□□ -1.47
TRIM25-208ENST00000574234 FGFR1P11362 822 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 CEACAM1P13688 526 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 PLA2G2AP14555 144 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 SPINK2P20155 84 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 SOX5P35711 763 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 CCR3P51677 355 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 GPC5P78333 572 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 FAM189BP81408 668 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 NFKB2Q00653 900 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 ADCY1Q08828 1119 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 PPFIA1Q13136 1202 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 FZD5Q13467 585 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 WTAPQ15007 396 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 SF3A2Q15428 464 aaKnown RBP5.88□□□□□ -1.47
TRIM25-208ENST00000574234 CCDC6Q16204 474 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 COL28A1Q2UY09 1125 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 SLC10A6Q3KNW5 377 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 SLC44A4Q53GD3 710 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 MARCH8Q5T0T0 291 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 ELMSAN1Q6PJG2 1045 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 VHLLQ6RSH7 139 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 METTL7BQ6UX53 244 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 UNC5AQ6ZN44 842 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 VSIG10LQ86VR7 867 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 SMC5Q8IY18 1101 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 VPS52Q8N1B4 723 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 RSPH1Q8WYR4 309 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 RELTQ969Z4 430 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 CHMP4CQ96CF2 233 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 TMEM169Q96HH4 297 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 CCDC136Q96JN2 1154 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 CASD1Q96PB1 797 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 HNRNPABQ99729 332 aaKnown RBP5.88□□□□□ -1.47
TRIM25-208ENST00000574234 ADAM19Q9H013 955 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 EPN3Q9H201 632 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 MAP3K20Q9NYL2 800 aaKnown RBP5.88□□□□□ -1.47
TRIM25-208ENST00000574234 STK39Q9UEW8 545 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 DPP7Q9UHL4 492 aa5.88□□□□□ -1.47
TRIM25-208ENST00000574234 MRPS17Q9Y2R5 130 aaKnown RBP5.88□□□□□ -1.47
TRIM25-208ENST00000574234 PCNX2A6NKB5 2137 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 DENND3A2RUS2 1198 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 SUSD5O60279 629 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 MGEA5O60502 916 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 SMNDC1O75940 238 aaKnown RBP eCLIP5.87□□□□□ -1.47
TRIM25-208ENST00000574234 TOP3BO95985 862 aaKnown RBP5.87□□□□□ -1.47
TRIM25-208ENST00000574234 GHRHP01286 108 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 PDHBP11177 359 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 ESRRAP11474 423 aaPredicted RBP5.87□□□□□ -1.47
TRIM25-208ENST00000574234 GNAT2P19087 354 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 CSRP1P21291 193 aaKnown RBP5.87□□□□□ -1.47
TRIM25-208ENST00000574234 CA8P35219 290 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 PBX3P40426 434 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 TDO2P48775 406 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 TROAPQ12815 778 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 NEDD9Q14511 834 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 GRIK4Q16099 956 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 NFE2Q16621 373 aaPredicted RBP5.87□□□□□ -1.47
TRIM25-208ENST00000574234 USH1GQ495M9 461 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 CCDC184Q52MB2 194 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 FOXB2Q5VYV0 432 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 CEP135Q66GS9 1140 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 ZNF852Q6ZMS4 543 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 STOX1Q6ZVD7 989 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 MTSS1LQ765P7 747 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 DDX53Q86TM3 631 aaKnown RBP5.87□□□□□ -1.47
TRIM25-208ENST00000574234 LONP2Q86WA8 852 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 SAMD3Q8N6K7 520 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 TBC1D5Q92609 795 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 KISS1RQ969F8 398 aaPredicted RBP5.87□□□□□ -1.47
TRIM25-208ENST00000574234 ADAM2Q99965 735 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 PDCD2LQ9BRP1 358 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 CELF4Q9BZC1 486 aaKnown RBP5.87□□□□□ -1.47
TRIM25-208ENST00000574234 NUCKS1Q9H1E3 243 aaKnown RBP5.87□□□□□ -1.47
TRIM25-208ENST00000574234 EPB41L4AQ9HCS5 686 aaPredicted RBP5.87□□□□□ -1.47
TRIM25-208ENST00000574234 ERAP1Q9NZ08 941 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 MCM8Q9UJA3 840 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 DNMT3LQ9UJW3 386 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 RAI2Q9Y5P3 530 aa5.87□□□□□ -1.47
TRIM25-208ENST00000574234 TNRC6BQ9UPQ9 1833 aaKnown RBP5.87□□□□□ -1.47
TRIM25-208ENST00000574234 VWA8A3KMH1 1905 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms