RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 EPS15L1Q9UBC2 864 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 SEL1LQ9UBV2 794 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 WDFY4Q6ZS81 3184 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 ANK1P16157 1881 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 WDR27A2RRH5 827 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 H7C4K7 107 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 ZSCAN22P10073 491 aaPredicted RBP28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 FSHRP23945 695 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 KCNA1Q09470 495 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 CTXN3Q4LDR2 81 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 IER5LQ5T953 404 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 JADE1Q6IE81 842 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 SLFN12LQ6IEE8 588 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 ZNF461Q8TAF7 563 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 HVCN1Q96D96 273 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 FBXL5Q9UKA1 691 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 AGO2Q9UKV8 859 aaKnown RBP28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 PCDHB8Q9UN66 801 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 STYXL1Q9Y6J8 313 aa28.31■■■□□ 2.12
NPLOC4-215ENST00000574095 KMT2EQ8IZD2 1858 aa28.3■■■□□ 2.12
NPLOC4-215ENST00000574095 XPOTO43592 962 aaKnown RBP28.3■■■□□ 2.12
NPLOC4-215ENST00000574095 XYLBO75191 536 aa28.3■■■□□ 2.12
NPLOC4-215ENST00000574095 VCPP55072 806 aaKnown RBP28.3■■■□□ 2.12
NPLOC4-215ENST00000574095 CD302Q8IX05 232 aa28.3■■■□□ 2.12
NPLOC4-215ENST00000574095 APPL2Q8NEU8 664 aa28.3■■■□□ 2.12
NPLOC4-215ENST00000574095 KCNH6Q9H252 994 aa28.3■■■□□ 2.12
NPLOC4-215ENST00000574095 ABLIM3O94929 683 aa28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 GCNT3O95395 438 aa28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 YEATS4O95619 227 aa28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 F13A1P00488 732 aa28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 LAMP2P13473 410 aa28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 SPATA1Q5VX52 437 aa28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 ST13P5Q8NFI4 369 aaPredicted RBP28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 POMGNT1Q8WZA1 660 aa28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 TSPAN18Q96SJ8 248 aa28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 PANK4Q9NVE7 773 aa28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 HCFC1R1Q9NWW0 138 aa28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 TIMM13Q9Y5L4 95 aaPredicted RBP28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.29■■■□□ 2.12
NPLOC4-215ENST00000574095 M0QZQ0 153 aa28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 PPEF2O14830 753 aa28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 NFICP08651 508 aa28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 ADSSP30520 456 aa28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 ELF1P32519 619 aa28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 CASP5P51878 434 aa28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 PKP1Q13835 747 aa28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 L1TD1Q5T7N2 865 aaKnown RBP28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 ZNF280DQ6N043 979 aa28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 BEST2Q8NFU1 509 aa28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 ACCSQ96QU6 501 aa28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 FGFBP2Q9BYJ0 223 aa28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 DNMT3BQ9UBC3 853 aaKnown RBP28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 DUSP12Q9UNI6 340 aa28.28■■■□□ 2.12
NPLOC4-215ENST00000574095 NOTCH4Q99466 2003 aa28.27■■■□□ 2.12
NPLOC4-215ENST00000574095 FRMD3A2A2Y4 597 aa28.27■■■□□ 2.12
NPLOC4-215ENST00000574095 NARSO43776 548 aaKnown RBP28.27■■■□□ 2.12
NPLOC4-215ENST00000574095 CUTAO60888 179 aa28.27■■■□□ 2.12
NPLOC4-215ENST00000574095 PDIA4P13667 645 aaKnown RBP28.27■■■□□ 2.12
NPLOC4-215ENST00000574095 AVPR2P30518 371 aa28.27■■■□□ 2.12
NPLOC4-215ENST00000574095 SHC4Q6S5L8 630 aa28.27■■■□□ 2.12
NPLOC4-215ENST00000574095 DSTYKQ6XUX3 929 aa28.27■■■□□ 2.12
NPLOC4-215ENST00000574095 RTL10Q7L3V2 364 aa28.27■■■□□ 2.12
NPLOC4-215ENST00000574095 OLFML3Q9NRN5 406 aa28.27■■■□□ 2.12
NPLOC4-215ENST00000574095 EXOC7Q9UPT5 735 aa28.27■■■□□ 2.12
NPLOC4-215ENST00000574095 PCDHB13Q9Y5F0 798 aa28.27■■■□□ 2.12
NPLOC4-215ENST00000574095 MUC6Q6W4X9 2439 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 PRRG1O14668 218 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 SEC24AO95486 1093 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 POU2F2P09086 479 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 ATF2P15336 505 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 TMEM132DQ14C87 1099 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 POSTNQ15063 836 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 E2F4Q16254 413 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 CRELD2Q6UXH1 353 aaPredicted RBP28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 SLC44A3Q8N4M1 653 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 ITFG1Q8TB96 612 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 DHX58Q96C10 678 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 ASB7Q9H672 318 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 CYP4F11Q9HBI6 524 aa28.26■■■□□ 2.11
NPLOC4-215ENST00000574095 ZDBF2Q9HCK1 2354 aa28.25■■■□□ 2.11
NPLOC4-215ENST00000574095 AARSP49588 968 aaKnown RBP eCLIP28.25■■■□□ 2.11
NPLOC4-215ENST00000574095 YWHAHQ04917 246 aaPredicted RBP28.25■■■□□ 2.11
NPLOC4-215ENST00000574095 C9orf57Q5W0N0 161 aa28.25■■■□□ 2.11
NPLOC4-215ENST00000574095 PRSS33Q8NF86 280 aa28.25■■■□□ 2.11
NPLOC4-215ENST00000574095 TNMDQ9H2S6 317 aa28.25■■■□□ 2.11
NPLOC4-215ENST00000574095 CDH7Q9ULB5 785 aa28.25■■■□□ 2.11
NPLOC4-215ENST00000574095 DERAQ9Y315 318 aa28.25■■■□□ 2.11
NPLOC4-215ENST00000574095 ARHGEF37A1IGU5 675 aa28.24■■■□□ 2.11
NPLOC4-215ENST00000574095 LRG1P02750 347 aa28.24■■■□□ 2.11
NPLOC4-215ENST00000574095 LILRA4P59901 499 aa28.24■■■□□ 2.11
NPLOC4-215ENST00000574095 PABPC1LQ4VXU2 614 aaKnown RBP28.24■■■□□ 2.11
NPLOC4-215ENST00000574095 TPGS2Q68CL5 300 aa28.24■■■□□ 2.11
NPLOC4-215ENST00000574095 CCDC65Q8IXS2 484 aa28.24■■■□□ 2.11
NPLOC4-215ENST00000574095 TCEAL8Q8IYN2 117 aa28.24■■■□□ 2.11
NPLOC4-215ENST00000574095 SYCP3Q8IZU3 236 aa28.24■■■□□ 2.11
NPLOC4-215ENST00000574095 ZSWIM2Q8NEG5 633 aa28.24■■■□□ 2.11
NPLOC4-215ENST00000574095 FGF13Q92913 245 aa28.24■■■□□ 2.11
NPLOC4-215ENST00000574095 NXPE3Q969Y0 559 aa28.24■■■□□ 2.11
NPLOC4-215ENST00000574095 ZFP37Q9Y6Q3 630 aaPredicted RBP28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms