RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 DNASE1L2Q92874 299 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 C18orf25Q96B23 403 aaPredicted RBP13.3□□□□□ -0.28
CCDC40-210ENST00000573903 ELSPBP1Q96BH3 223 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 SUSD3Q96L08 255 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 ZNF512Q96ME7 567 aaPredicted RBP13.3□□□□□ -0.28
CCDC40-210ENST00000573903 NTPCRQ9BSD7 190 aaKnown RBP13.3□□□□□ -0.28
CCDC40-210ENST00000573903 ZFP14Q9HCL3 533 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 KCND2Q9NZV8 630 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 LARSQ9P2J5 1176 aaKnown RBP13.3□□□□□ -0.28
CCDC40-210ENST00000573903 FBXL5Q9UKA1 691 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 FBXO4Q9UKT5 387 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 MAFFQ9ULX9 164 aa13.3□□□□□ -0.28
CCDC40-210ENST00000573903 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.3□□□□□ -0.28
CCDC40-210ENST00000573903 H3BQV1 296 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 ABLIM1O14639 778 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 SPTLC1O15269 473 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 XPOTO43592 962 aaKnown RBP13.29□□□□□ -0.28
CCDC40-210ENST00000573903 ATP2C1P98194 919 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-210ENST00000573903 PPP2R3AQ06190 1150 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 ADCY1Q08828 1119 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 KYAT1Q16773 422 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 KCNK18Q7Z418 384 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 SYT2Q8N9I0 419 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-210ENST00000573903 LEMD2Q8NC56 503 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 RUBCNQ92622 972 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 DDX12PQ92771 950 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 ZBTB45Q96K62 511 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-210ENST00000573903 OXCT2Q9BYC2 517 aaPredicted RBP13.29□□□□□ -0.28
CCDC40-210ENST00000573903 BRD9Q9H8M2 597 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 ASAH2Q9NR71 780 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 AFF4Q9UHB7 1163 aaKnown RBP13.29□□□□□ -0.28
CCDC40-210ENST00000573903 PCDHB8Q9UN66 801 aa13.29□□□□□ -0.28
CCDC40-210ENST00000573903 COL4A3Q01955 1670 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 VWA3AA6NCI4 1184 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 MAN2B1O00754 1011 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 MICAL2O94851 1124 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 CLTAP09496 248 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 CXCL8P10145 99 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 MAPTP10636 758 aaKnown RBP13.28□□□□□ -0.28
CCDC40-210ENST00000573903 CD72P21854 359 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 LIG4P49917 911 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 YWHAHQ04917 246 aaPredicted RBP13.28□□□□□ -0.28
CCDC40-210ENST00000573903 CSTF1Q05048 431 aaKnown RBP13.28□□□□□ -0.28
CCDC40-210ENST00000573903 MCL1Q07820 350 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 TWF1Q12792 350 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 PLD1Q13393 1074 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 MRPL58Q14197 206 aaKnown RBP13.28□□□□□ -0.28
CCDC40-210ENST00000573903 IL17AQ16552 155 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 SLC10A6Q3KNW5 377 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 SEZ6Q53EL9 994 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 PRSS36Q5K4E3 855 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 HYIQ5T013 277 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 TANGO2Q6ICL3 276 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 USP37Q86T82 979 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 KIAA2013Q8IYS2 634 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 TMEM161BQ8NDZ6 487 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 ATRIPQ8WXE1 791 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 SECISBP2LQ93073 1101 aaKnown RBP13.28□□□□□ -0.28
CCDC40-210ENST00000573903 KIF12Q96FN5 646 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 PLIN2Q99541 437 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 MMTAG2Q9BU76 263 aaKnown RBP13.28□□□□□ -0.28
CCDC40-210ENST00000573903 TRMT61BQ9BVS5 477 aaKnown RBP13.28□□□□□ -0.28
CCDC40-210ENST00000573903 PLEKHA5Q9HAU0 1116 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 HEBP1Q9NRV9 189 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 NCDNQ9UBB6 729 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 TUBGCP4Q9UGJ1 667 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 UBQLN1Q9UMX0 589 aaKnown RBP13.28□□□□□ -0.28
CCDC40-210ENST00000573903 SMC3Q9UQE7 1217 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 VPS13AQ96RL7 3174 aa13.28□□□□□ -0.28
CCDC40-210ENST00000573903 RIF1Q5UIP0 2472 aaKnown RBP13.28□□□□□ -0.28
CCDC40-210ENST00000573903 HNRNPDLO14979 420 aaKnown RBP13.27□□□□□ -0.29
CCDC40-210ENST00000573903 TBC1D4O60343 1298 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 SEC24AO95486 1093 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 PLA2G4BP0C869 781 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 MYL4P12829 197 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 SCP2P22307 547 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 TARSP26639 723 aaKnown RBP13.27□□□□□ -0.29
CCDC40-210ENST00000573903 GJB2P29033 226 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 RPS9P46781 194 aaKnown RBP13.27□□□□□ -0.29
CCDC40-210ENST00000573903 SLC12A3P55017 1021 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 GRM2Q14416 872 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 PPP2R5DQ14738 602 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 ARL6IP4Q66PJ3 421 aaKnown RBP13.27□□□□□ -0.29
CCDC40-210ENST00000573903 DSTYKQ6XUX3 929 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 RASSF8Q8NHQ8 419 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 DEPDC1BQ8WUY9 529 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 IRF7Q92985 503 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 TCEAL4Q96EI5 215 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 CALML4Q96GE6 196 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 PLA2G2FQ9BZM2 168 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 SLITRK6Q9H5Y7 841 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 ODF2LQ9ULJ1 636 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 MTF2Q9Y483 593 aaPredicted RBP13.27□□□□□ -0.29
CCDC40-210ENST00000573903 PCDHGA2Q9Y5H1 932 aa13.27□□□□□ -0.29
CCDC40-210ENST00000573903 K7ENM7 598 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 SLC26A4O43511 780 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 FAM13AO94988 1023 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 KRT18P05783 430 aaKnown RBP13.26□□□□□ -0.29
CCDC40-210ENST00000573903 CYP3A5P20815 502 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 LRPAP1P30533 357 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms