RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MSH2P43246 934 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 SSR1P43307 286 aaKnown RBP16.61■□□□□ 0.25
NUP88-207ENST00000573584 MAGEA4P43358 317 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 PTP4A2Q12974 167 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 TMED2Q15363 201 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 RNF43Q68DV7 783 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 ANO5Q75V66 913 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 RELL1Q8IUW5 271 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 CDAN1Q8IWY9 1227 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 DHX37Q8IY37 1157 aaKnown RBP16.61■□□□□ 0.25
NUP88-207ENST00000573584 GPD1LQ8N335 351 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 SYTL5Q8TDW5 730 aaPredicted RBP16.61■□□□□ 0.25
NUP88-207ENST00000573584 GRAMD1AQ96CP6 724 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 NOP53Q9NZM5 478 aaKnown RBP16.61■□□□□ 0.25
NUP88-207ENST00000573584 ZNF70Q9UC06 446 aaPredicted RBP16.61■□□□□ 0.25
NUP88-207ENST00000573584 H0YIN7 160 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 FDX1P10109 184 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 CCND1P24385 295 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 GJC1P36383 396 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 FAM47EQ6ZV65 393 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 ZNF677Q86XU0 584 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 ECHDC2Q86YB7 292 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.61■□□□□ 0.25
NUP88-207ENST00000573584 TAAR1Q96RJ0 339 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 UMODL1Q5DID0 1318 aa16.61■□□□□ 0.25
NUP88-207ENST00000573584 FAM47DPA6NHR8 397 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 YDJCA8MPS7 323 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 PSTPIP1O43586 416 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 ZC3H11AO75152 810 aaKnown RBP eCLIP16.6■□□□□ 0.25
NUP88-207ENST00000573584 JAK3P52333 1124 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 TAS2R40P59535 323 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 P3H1Q32P28 736 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 C11orf70Q9BRQ4 267 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 NTPCRQ9BSD7 190 aaKnown RBP16.6■□□□□ 0.25
NUP88-207ENST00000573584 USTQ9Y2C2 406 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
NUP88-207ENST00000573584 KIF1CO43896 1103 aaKnown RBP16.6■□□□□ 0.25
NUP88-207ENST00000573584 CD58P19256 250 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 WDR4P57081 412 aaKnown RBP16.6■□□□□ 0.25
NUP88-207ENST00000573584 BPIFB4P59827 614 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 CRYMQ14894 314 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 LIN9Q5TKA1 542 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 MON1BQ7L1V2 547 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 KIRREL3Q8IZU9 778 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 MAML1Q92585 1016 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 EURLQ9NYK6 297 aa16.6■□□□□ 0.25
NUP88-207ENST00000573584 CYP1A1P04798 512 aaPredicted RBP16.59■□□□□ 0.25
NUP88-207ENST00000573584 SFNP31947 248 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 ACVR2BQ13705 512 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 NAA25Q14CX7 972 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 WDR44Q5JSH3 913 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 LMBRD2Q68DH5 695 aaPredicted RBP16.59■□□□□ 0.25
NUP88-207ENST00000573584 KATNAL2Q8IYT4 538 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 ZCCHC9Q8N567 271 aaKnown RBP16.59■□□□□ 0.25
NUP88-207ENST00000573584 SPIRE2Q8WWL2 714 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 ZNF516Q92618 1163 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 BICD1Q96G01 975 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 ADAM22Q9P0K1 906 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 EXOC1LA0A1B0GW35 172 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 CCNB1P14635 433 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 KLRC2P26717 231 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 PGM5Q15124 567 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 DLGAP5Q15398 846 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 ANKS1BQ7Z6G8 1248 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 PASD1Q8IV76 773 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 CEP170P1Q96L14 293 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 CFAP57Q96MR6 1250 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 TMEM39BQ9GZU3 492 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 ZNFX1Q9P2E3 1918 aaKnown RBP16.59■□□□□ 0.25
NUP88-207ENST00000573584 SPAG7O75391 227 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 UNC5CO95185 931 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 POTEJP0CG39 1038 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 DSG3P32926 999 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 RPS6P62753 249 aaKnown RBP16.59■□□□□ 0.25
NUP88-207ENST00000573584 LACTBP83111 547 aaPredicted RBP16.59■□□□□ 0.25
NUP88-207ENST00000573584 KRT76Q01546 638 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 MAMLD1Q13495 774 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 ANKLE1Q8NAG6 615 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 FBF1Q8TES7 1133 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 ETNK1Q9HBU6 452 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 RAVER2Q9HCJ3 691 aaKnown RBP16.59■□□□□ 0.25
NUP88-207ENST00000573584 MRPL47Q9HD33 250 aaKnown RBP16.59■□□□□ 0.25
NUP88-207ENST00000573584 SAYSD1Q9NPB0 183 aa16.59■□□□□ 0.25
NUP88-207ENST00000573584 TESPA1A2RU30 521 aaPredicted RBP16.58■□□□□ 0.24
NUP88-207ENST00000573584 DIAPH2O60879 1101 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 CFHP08603 1231 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 ABHD2P08910 425 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 SKIV2L2P42285 1042 aaKnown RBP16.58■□□□□ 0.24
NUP88-207ENST00000573584 ATP11AP98196 1134 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 CCDC15Q0P6D6 951 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 BRDTQ58F21 947 aaPredicted RBP16.58■□□□□ 0.24
NUP88-207ENST00000573584 RIBC1Q8N443 379 aaPredicted RBP16.58■□□□□ 0.24
NUP88-207ENST00000573584 OGFOD1Q8N543 542 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 EXD1Q8NHP7 514 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.58■□□□□ 0.24
NUP88-207ENST00000573584 CNTNAP1P78357 1384 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 TNNI1P19237 187 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 SSTR3P32745 418 aaPredicted RBP16.58■□□□□ 0.24
NUP88-207ENST00000573584 SPOPLQ6IQ16 392 aa16.58■□□□□ 0.24
NUP88-207ENST00000573584 STYK1Q6J9G0 422 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms