RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 KCNH6Q9H252 994 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 ZHX3Q9H4I2 956 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 OLFML3Q9NRN5 406 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 HCFC1R1Q9NWW0 138 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 TFIP11Q9UBB9 837 aaKnown RBP18.84■□□□□ 0.61
SMG6-212ENST00000573153 SEL1LQ9UBV2 794 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 UBQLN1Q9UMX0 589 aaKnown RBP18.84■□□□□ 0.61
SMG6-212ENST00000573153 DUSP12Q9UNI6 340 aa18.84■□□□□ 0.61
SMG6-212ENST00000573153 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.84■□□□□ 0.61
SMG6-212ENST00000573153 ARHGEF37A1IGU5 675 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 SPTLC1O15269 473 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 CCL16O15467 120 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 TRAPPC3O43617 180 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 F13A1P00488 732 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 LAMP2P13473 410 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 TCF15Q12870 199 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 HTR4Q13639 388 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 CWF19L1Q69YN2 538 aaKnown RBP18.83■□□□□ 0.6
SMG6-212ENST00000573153 JADE1Q6IE81 842 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 SV2BQ7L1I2 683 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 GLIS3Q8NEA6 775 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 BEST2Q8NFU1 509 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 ZNF461Q8TAF7 563 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 HVCN1Q96D96 273 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 KIF12Q96FN5 646 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 MSTO1Q9BUK6 570 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 PANK2Q9BZ23 570 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 KBTBD4Q9NVX7 518 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 DNMT3BQ9UBC3 853 aaKnown RBP18.83■□□□□ 0.6
SMG6-212ENST00000573153 PCDHB8Q9UN66 801 aa18.83■□□□□ 0.6
SMG6-212ENST00000573153 ANO9A1A5B4 782 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 NPR3P17342 541 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 GAP43P17677 238 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 HOXD11P31277 338 aaPredicted RBP18.82■□□□□ 0.6
SMG6-212ENST00000573153 ACOT2P49753 483 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 PPP2R3AQ06190 1150 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 TDGQ13569 410 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 SLC5A9Q2M3M2 681 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 UVSSAQ2YD98 709 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 PPM1LQ5SGD2 360 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 LIN9Q5TKA1 542 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 SCARA3Q6AZY7 606 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 ELMSAN1Q6PJG2 1045 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 GET4Q7L5D6 327 aaPredicted RBP18.82■□□□□ 0.6
SMG6-212ENST00000573153 EFCAB13Q8IY85 973 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 ITFG1Q8TB96 612 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 TSPAN18Q96SJ8 248 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 IGSF9Q9P2J2 1179 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 COL4A3Q01955 1670 aa18.82■□□□□ 0.6
SMG6-212ENST00000573153 SCN1AP35498 2009 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 PIRO00625 290 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 CUTAO60888 179 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 OAZ2O95190 189 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 ATF2P15336 505 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 AVPR2P30518 371 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 GBP2P32456 591 aaPredicted RBP18.81■□□□□ 0.6
SMG6-212ENST00000573153 MCM4P33991 863 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 HOXD13P35453 343 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 STAT6P42226 847 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 NHLH1Q02575 133 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 L1TD1Q5T7N2 865 aaKnown RBP18.81■□□□□ 0.6
SMG6-212ENST00000573153 RTL10Q7L3V2 364 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 SLC44A3Q8N4M1 653 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 PDILTQ8N807 584 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 TMEM105Q8N8V8 129 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 ST13P5Q8NFI4 369 aaPredicted RBP18.81■□□□□ 0.6
SMG6-212ENST00000573153 CXorf38Q8TB03 319 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 STAMQ92783 540 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 FAM122AQ96E09 287 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 RPP25Q9BUL9 199 aaKnown RBP18.81■□□□□ 0.6
SMG6-212ENST00000573153 CUEDC2Q9H467 287 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 RPF1Q9H9Y2 349 aaKnown RBP18.81■□□□□ 0.6
SMG6-212ENST00000573153 TBC1D7Q9P0N9 293 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 NUB1Q9Y5A7 615 aa18.81■□□□□ 0.6
SMG6-212ENST00000573153 MATR3P43243 847 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMG6-212ENST00000573153 POU5F1Q01860 360 aaKnown RBP18.8■□□□□ 0.6
SMG6-212ENST00000573153 EHHADHQ08426 723 aa18.8■□□□□ 0.6
SMG6-212ENST00000573153 FOXD4L5Q5VV16 416 aaPredicted RBP18.8■□□□□ 0.6
SMG6-212ENST00000573153 C9orf57Q5W0N0 161 aa18.8■□□□□ 0.6
SMG6-212ENST00000573153 CNNM4Q6P4Q7 775 aa18.8■□□□□ 0.6
SMG6-212ENST00000573153 TCEAL8Q8IYN2 117 aa18.8■□□□□ 0.6
SMG6-212ENST00000573153 KCNG4Q8TDN1 519 aa18.8■□□□□ 0.6
SMG6-212ENST00000573153 FOXD4L4Q8WXT5 416 aaPredicted RBP18.8■□□□□ 0.6
SMG6-212ENST00000573153 FGF13Q92913 245 aa18.8■□□□□ 0.6
SMG6-212ENST00000573153 FGF14Q92915 247 aa18.8■□□□□ 0.6
SMG6-212ENST00000573153 BORCS6Q96GS4 357 aa18.8■□□□□ 0.6
SMG6-212ENST00000573153 CRISPLD1Q9H336 500 aa18.8■□□□□ 0.6
SMG6-212ENST00000573153 ASB7Q9H672 318 aa18.8■□□□□ 0.6
SMG6-212ENST00000573153 PIDD1Q9HB75 910 aa18.8■□□□□ 0.6
SMG6-212ENST00000573153 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMG6-212ENST00000573153 AGO2Q9UKV8 859 aaKnown RBP18.8■□□□□ 0.6
SMG6-212ENST00000573153 ZDHHC9Q9Y397 364 aa18.8■□□□□ 0.6
SMG6-212ENST00000573153 TIMM13Q9Y5L4 95 aaPredicted RBP18.8■□□□□ 0.6
SMG6-212ENST00000573153 FSHRP23945 695 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 LILRA4P59901 499 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 CTXN3Q4LDR2 81 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 PRSS36Q5K4E3 855 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 ADALQ6DHV7 355 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 CD302Q8IX05 232 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 NPAS3Q8IXF0 933 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms