RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SYT1P21579 422 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 CCR2P41597 374 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 GTF2BQ00403 316 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 PABPC1LQ4VXU2 614 aaKnown RBP19.74■□□□□ 0.75
CHD3-214ENST00000572579 RTL10Q7L3V2 364 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 CCDC105Q8IYK2 499 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 TCEAL8Q8IYN2 117 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 TCEAL4Q96EI5 215 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 KIF12Q96FN5 646 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 PLA2G2FQ9BZM2 168 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 PARVGQ9HBI0 331 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 DLGAP2Q9P1A6 1054 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 NUB1Q9Y5A7 615 aa19.74■□□□□ 0.75
CHD3-214ENST00000572579 PROB1E7EW31 1015 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 K7ENM7 598 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 M0QZQ0 153 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 FAM13AO94988 1023 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 BMP15O95972 392 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 GLULP15104 373 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 MCM4P33991 863 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 AARSP49588 968 aaKnown RBP eCLIP19.73■□□□□ 0.75
CHD3-214ENST00000572579 CTXN3Q4LDR2 81 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 PRSS36Q5K4E3 855 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 ASCL5Q7RTU5 278 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 DTWD2Q8NBA8 298 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 BICD1Q96G01 975 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 KXD1Q9BQD3 176 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 TBC1D17Q9HA65 648 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 CPSF3Q9UKF6 684 aaKnown RBP19.73■□□□□ 0.75
CHD3-214ENST00000572579 KCNH3Q9ULD8 1083 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 PCDHB8Q9UN66 801 aa19.73■□□□□ 0.75
CHD3-214ENST00000572579 SPTLC1O15269 473 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 OGTO15294 1046 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 LRRN2O75325 713 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 MOSPD3O75425 235 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 OAZ2O95190 189 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 CEBPBP17676 345 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 LIG4P49917 911 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 RNF19BQ6ZMZ0 732 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 LARP4BQ92615 738 aaKnown RBP19.72■□□□□ 0.75
CHD3-214ENST00000572579 MCRS1Q96EZ8 462 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 RTP3Q9BQQ7 232 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 STRA6Q9BX79 667 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 CRISPLD1Q9H336 500 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 CYP4F11Q9HBI6 524 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 AVENQ9NQS1 362 aaPredicted RBP19.72■□□□□ 0.75
CHD3-214ENST00000572579 ARHGEF3Q9NR81 526 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 CEP72Q9P209 647 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 MTMR6Q9Y217 621 aa19.72■□□□□ 0.75
CHD3-214ENST00000572579 COL4A3Q01955 1670 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 A0A087X0B3 334 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 MYMKA6NI61 221 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 SHISA7A6NL88 538 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 H0YCG3 227 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 H7C4K7 107 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 HNRNPDLO14979 420 aaKnown RBP19.71■□□□□ 0.75
CHD3-214ENST00000572579 DCNP07585 359 aaKnown RBP19.71■□□□□ 0.75
CHD3-214ENST00000572579 OR4Q2P0C623 313 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 CYP3A5P20815 502 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 NBL1P41271 181 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 MATR3P43243 847 aaKnown RBP eCLIP19.71■□□□□ 0.75
CHD3-214ENST00000572579 KCNA1Q09470 495 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 MAP4K3Q8IVH8 894 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 HS6ST3Q8IZP7 471 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 BEST2Q8NFU1 509 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 ZSWIM3Q96MP5 696 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 BACH2Q9BYV9 841 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 FOXQ1Q9C009 403 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 ZHX3Q9H4I2 956 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 MRPS23Q9Y3D9 190 aaKnown RBP19.71■□□□□ 0.75
CHD3-214ENST00000572579 MTF2Q9Y483 593 aaPredicted RBP19.71■□□□□ 0.75
CHD3-214ENST00000572579 SRPRBQ9Y5M8 271 aaKnown RBP19.71■□□□□ 0.75
CHD3-214ENST00000572579 INSL5Q9Y5Q6 135 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 STYXL1Q9Y6J8 313 aa19.71■□□□□ 0.75
CHD3-214ENST00000572579 PTPRZ1P23471 2315 aaPredicted RBP19.71■□□□□ 0.75
CHD3-214ENST00000572579 GFRA3O60609 400 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 PPP1R37O75864 691 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 NFICP08651 508 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 ADSSP30520 456 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 ACOT2P49753 483 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 CEBPZQ03701 1054 aaKnown RBP19.7■□□□□ 0.74
CHD3-214ENST00000572579 ADCY1Q08828 1119 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 SNW1Q13573 536 aaKnown RBP19.7■□□□□ 0.74
CHD3-214ENST00000572579 SPATA1Q5VX52 437 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 TPGS2Q68CL5 300 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 SCARA3Q6AZY7 606 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 TANGO2Q6ICL3 276 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 JADE1Q6IE81 842 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 PHLDB3Q6NSJ2 640 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 ZNF720Q7Z2F6 126 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 FRMD5Q7Z6J6 570 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 ZSWIM2Q8NEG5 633 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 DNAJC19Q96DA6 116 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 CORO1BQ9BR76 489 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 IRF2BPLQ9H1B7 796 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 ST6GALNAC4Q9H4F1 302 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 RPF1Q9H9Y2 349 aaKnown RBP19.7■□□□□ 0.74
CHD3-214ENST00000572579 FOXD4L1Q9NU39 408 aa19.7■□□□□ 0.74
CHD3-214ENST00000572579 UBQLN1Q9UMX0 589 aaKnown RBP19.7■□□□□ 0.74
CHD3-214ENST00000572579 RIF1Q5UIP0 2472 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms